RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 COTL1Q14019 142 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 VAMP3Q15836 100 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 KCNJ8Q15842 424 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PET117Q6UWS5 81 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SYT13Q7L8C5 426 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 SLC24A4Q8NFF2 622 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 OR5M8Q8NGP6 311 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 IRF7Q92985 503 aa8.73□□□□□ -1.01
VPS13A-203ENST00000360280 COL3A1P02461 1466 aaPredicted RBP8.73□□□□□ -1.01
VPS13A-203ENST00000360280 PTBP3O95758 552 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CT45A10P0DMU9 189 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 TIMP2P16035 220 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CSNK1A1P48729 337 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 DUSP6Q16828 381 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ABHD17BQ5VST6 288 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 YTHDF2Q9Y5A9 579 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OR8U8P0C7N1 319 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 TACR3P29371 465 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 FPGSQ05932 587 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 HBMQ6B0K9 141 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 C20orf85Q9H1P6 137 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 NWD2Q9ULI1 1742 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SLC35E2BP0CK96 405 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CD79AP11912 226 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 KCNQ1P51787 676 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 BPIFB2Q8N4F0 458 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM163Q8TC26 289 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 BPIFA2Q96DR5 249 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OLAHQ9NV23 265 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 VSX1Q9NZR4 365 aaPredicted RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CLDN1O95832 211 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SNHG28P0DPA3 235 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RGMBQ6NW40 437 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 IL34Q6ZMJ4 242 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SUMF1Q8NBK3 374 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OR10Z1Q8NGY1 313 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 TMEM175Q9BSA9 504 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RING1Q06587 406 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ARHGAP11BQ3KRB8 267 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 MKXQ8IYA7 352 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SCLYQ96I15 445 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 NXF5Q9H1B4 397 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SPHK1Q9NYA1 384 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CLDN24A6NM45 220 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 FCRLBQ6BAA4 426 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 MCATQ8IVS2 390 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SLC25A21Q9BQT8 299 aaPredicted RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 KCNK13Q9HB14 408 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SULT2B1O00204 365 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 LALBAP00709 142 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ADRB1P08588 477 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 VIPR2P41587 438 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 AAK1Q2M2I8 961 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF684Q5T5D7 378 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CLSTN3Q9BQT9 956 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.72□□□□□ -1.017e-7■■■■■ 33.2
VPS13A-203ENST00000360280 Q1RN00 199 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ZNF596Q8TC21 504 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CCDC74AQ96AQ1 378 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 IKZF4Q9H2S9 585 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RNF150Q9ULK6 438 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 CBR1P16152 277 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 MAKP20794 623 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 INCA1Q0VD86 236 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SLC17A1Q14916 467 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 H3F3CQ6NXT2 135 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 MEPCEQ7L2J0 689 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SIGLEC10Q96LC7 697 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SIX2Q9NPC8 291 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OR14J1Q9UGF5 321 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 PCDHGA1Q9Y5H4 931 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 PTGDR2Q9Y5Y4 395 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 METTL15A6NJ78 407 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RFC3P40938 356 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 HNRNPA3P51991 378 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 KIAA0141Q14154 515 aaPredicted RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 ADGRG3Q86Y34 549 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 LRRC56Q8IYG6 542 aaPredicted RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OR6C68A6NDL8 312 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 UBL3O95164 117 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SFTPDP35247 375 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RAC1P63000 192 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SLC35A2P78381 396 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 SERTAD2Q14140 314 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 GRM7Q14831 915 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 OR7G3Q8NG95 312 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RAB3CQ96E17 227 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 PKMYT1Q99640 499 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 IL3RAP26951 378 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 RPL22L1Q6P5R6 122 aaKnown RBP8.72□□□□□ -1.01
VPS13A-203ENST00000360280 COMMD6Q7Z4G1 85 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 DNAJC5GQ8N7S2 189 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 FZD8Q9H461 694 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 GORASP2Q9H8Y8 452 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 INSL6Q9Y581 213 aa8.72□□□□□ -1.01
VPS13A-203ENST00000360280 FAM155AB1AL88 458 aaPredicted RBP8.71□□□□□ -1.01
VPS13A-203ENST00000360280 CPOXP36551 454 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 NADSYN1Q6IA69 706 aa8.71□□□□□ -1.01
VPS13A-203ENST00000360280 KLHDC8BQ8IXV7 354 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms