RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MMP28Q9H239 520 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 C14orf105Q9NVL8 296 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 TESQ9UGI8 421 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 A8MUA0 341 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 PLD2O14939 933 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 THY1P04216 161 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 DRD5P21918 477 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 GINS1Q14691 196 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 RSPO4Q2I0M5 234 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 FLYWCH1Q4VC44 716 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 YIF1BQ5BJH7 314 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 YOD1Q5VVQ6 348 aaPredicted RBP12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 MRGPREQ86SM8 312 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 NKAIN4Q8IVV8 208 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 PRSS58Q8IYP2 241 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 RNF113BQ8IZP6 322 aaKnown RBP12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC34A3Q8N130 599 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 TEX47Q8TBZ9 253 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 CHAC2Q8WUX2 184 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 ULBP3Q9BZM4 244 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 SLA2Q9H6Q3 261 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 HHATLQ9HCP6 504 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC22A11Q9NSA0 550 aa12.74□□□□□ -0.37
CSNK1E-201ENST00000359867 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 B4E171 279 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 MAOAP21397 527 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 FBLP22087 321 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 SSTR4P31391 388 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 TSPAN7P41732 249 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 LSM11P83369 360 aaKnown RBP eCLIP12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 EFNB1P98172 346 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 ARMC4Q5T2S8 1044 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 LCN10Q6JVE6 187 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 UBQLNLQ8IYU4 475 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF559Q9BR84 538 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 G6PC3Q9BUM1 346 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 PRRG3Q9BZD7 231 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 Q9N2J8 555 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 LANCL2Q9NS86 450 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 CTSFQ9UBX1 484 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 PRODH2Q9UF12 536 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC7A7Q9UM01 511 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 NTNG1Q9Y2I2 539 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 RPL36Q9Y3U8 105 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 KLF4O43474 513 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 UQCRC1P31930 480 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 PSMD4P55036 377 aaKnown RBP12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 DSG2Q14126 1118 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 PLAG1Q6DJT9 500 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC27A4Q6P1M0 643 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 SHISA6Q6ZSJ9 500 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 KIF18BQ86Y91 864 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 GRPEL2Q8TAA5 225 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 ASB15Q8WXK1 588 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 OR10A5Q9H207 317 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 TVP23BQ9NYZ1 205 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 ATPIF1Q9UII2 106 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 FREM2Q5SZK8 3169 aa12.73□□□□□ -0.37
CSNK1E-201ENST00000359867 LRRTM2O43300 516 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 CPNE3O75131 537 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 IFNA16P05015 189 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 RFX2P48378 723 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 AP2S1P53680 142 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 NCF4Q15080 339 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 OR1Q1Q15612 314 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF141Q15928 474 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 DCAF12Q5T6F0 453 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF544Q6NX49 715 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 FAM199XQ6PEV8 388 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF517Q6ZMY9 492 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 COX15Q7KZN9 410 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 CLDN22Q8N7P3 220 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 TCEANCQ8N8B7 351 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 OSTF1Q92882 214 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 FAM46AQ96IP4 442 aaKnown RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 TM9SF2Q99805 663 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 NPIPA5A0A0B4J1W7 369 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 NPIPA7E9PJI5 369 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 HRKO00198 91 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 NPIPA8P0DM63 369 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF79Q15937 498 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF385CQ66K41 422 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ACSM5Q6NUN0 579 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 QSOX2Q6ZRP7 698 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZAR1Q86SH2 424 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF615Q8N8J6 731 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 TMEM255BQ8WV15 326 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 TMEM203Q969S6 136 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 DACT3Q96B18 629 aaPredicted RBP12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 RNF170Q96K19 258 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 PRSS27Q9BQR3 290 aa12.72□□□□□ -0.37
CSNK1E-201ENST00000359867 DLL3Q9NYJ7 618 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms