RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ARRDC5A6NEK1 342 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 MAGEB4O15481 346 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 FGF17O60258 216 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CDC40O60508 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZNF432O94892 652 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 NTN1O95631 604 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 GIFP27352 417 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CD6P30203 668 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 C21orf58P58505 322 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ADAM8P78325 824 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CDC20Q12834 499 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ELOCQ15369 112 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 SLC51BQ86UW2 128 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 UBQLNLQ8IYU4 475 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 TMEM99Q8N816 258 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 FAM3CQ92520 227 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 SEC61A2Q9H9S3 476 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 IFT46Q9NQC8 304 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 SCML1Q9UN30 329 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 TRDV1A0A1B0GX56 115 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CDHR4A6H8M9 788 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ACOD1A6NK06 481 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 GCM2O75603 506 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 RAB30Q15771 203 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 HYAL4Q2M3T9 481 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 SCGB2B2Q4G0G5 96 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 TOR2AQ5JU69 321 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZNF322Q6U7Q0 402 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 GKN2Q86XP6 184 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZNF615Q8N8J6 731 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 AVL9Q8NBF6 648 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ADOQ96SZ5 270 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 C6orf106Q9H6K1 298 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 PRDM7Q9NQW5 492 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 RBFOX1Q9NWB1 397 aaKnown RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 RP1L1Q8IWN7 2480 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CHD5Q8TDI0 1954 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 PRKNO60260 465 aaPredicted RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ALDOBP05062 364 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 F13BP05160 661 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 INHBBP09529 407 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CCKBRP32239 447 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 DRD3P35462 400 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 MVDP53602 400 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CLDN12P56749 244 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ARTNQ5T4W7 220 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ULK3Q6PHR2 472 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZNF227Q86WZ6 799 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZFPM2Q8WW38 1151 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 FGF14Q92915 247 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 FCRL1Q96LA6 429 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 MYADMQ96S97 322 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 RPP25Q9BUL9 199 aaKnown RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 TEX101Q9BY14 249 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 MED17Q9NVC6 651 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 TESQ9UGI8 421 aaKnown RBP11.36□□□□□ -0.59
COL20A1-201ENST00000358894 CACNG2Q9Y698 323 aa11.36□□□□□ -0.59
COL20A1-201ENST00000358894 ZSWIM8A7E2V4 1837 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 RAB19A4D1S5 217 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 C17orf105B2RV13 164 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 HYAL3O43820 417 aaPredicted RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 RP2O75695 350 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 KCNK2O95069 426 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 SPDEFO95238 335 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 EGFP01133 1207 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 MAPK3P27361 379 aaPredicted RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 RPS5P46782 204 aaKnown RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 PCBP4P57723 403 aaKnown RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 PLCXD2Q0VAA5 305 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 FGL2Q14314 439 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 MLF2Q15773 248 aaPredicted RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 CREB3L2Q70SY1 520 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 SSX6Q7RTT6 188 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 LRRC28Q86X40 367 aaPredicted RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 ETFBKMTQ8IXQ9 262 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 RNASE11Q8TAA1 199 aaKnown RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 MCCC2Q9HCC0 563 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 B3GNT2Q9NY97 397 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
COL20A1-201ENST00000358894 FAM186AA6NE01 2351 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 CPEP16870 476 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 CTHP32929 405 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 NUDT1P36639 197 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 NRG3P56975 720 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 AGERQ15109 404 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 NSDHLQ15738 373 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 ALG10Q5BKT4 473 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 C12orf73Q69YU5 71 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 SYT9Q86SS6 491 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 OR13H1Q8NG92 308 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 NMNAT3Q96T66 252 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 PBX4Q9BYU1 374 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 KNTC1P50748 2209 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 A0A0G2JMP0 313 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 A0A0X1KG70 313 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 HCCSP53701 268 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 INSL4Q14641 139 aa11.35□□□□□ -0.59
COL20A1-201ENST00000358894 TMEM196Q5HYL7 178 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms