RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TMEM88Q6PEY1 159 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM239Q8WW34 195 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 RSC1A1Q92681 617 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ADAM19Q9H013 955 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 DMRT3Q9NQL9 472 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ASH2LQ9UBL3 628 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 NPIPA2E9PIF3 369 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 NPIPA3F8WFD2 350 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 PIPP12273 146 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 EEF1A1P68104 462 aaKnown RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 MRPS34P82930 218 aaKnown RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SLC22A6Q4U2R8 563 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 EEF1A1P5Q5VTE0 462 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 CHADLQ6NUI6 762 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 FAM199XQ6PEV8 388 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SEMA6DQ8NFY4 1073 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ASB17Q8WXJ9 295 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 WDR77Q9BQA1 342 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SEC22CQ9BRL7 303 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 PHLPP1O60346 1717 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 TRIM77I1YAP6 450 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SERPINE2P07093 398 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 HBA1P69905 142 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SLC5A12Q1EHB4 618 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF789Q5FWF6 425 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 PLPP4Q5VZY2 271 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SAXO2Q658L1 398 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM225Q6GV28 225 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 FAM111BQ6SJ93 734 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 GPR155Q7Z3F1 870 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF808Q8N4W9 903 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 MTMR14Q8NCE2 650 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 OR52I1Q8NGK6 324 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 OR6M1Q8NGM8 313 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM174Q8WUU8 243 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 CPPED1Q9BRF8 314 aaPredicted RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 EXOSC3Q9NQT5 275 aaKnown RBP8.21□□□□□ -1.09
COL6A6-201ENST00000358511 SLC6A14Q9UN76 642 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 URGCP-MRPS24S4R325 110 aa8.21□□□□□ -1.09
COL6A6-201ENST00000358511 KIAA0355O15063 1070 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CPEP16870 476 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TMEM11P17152 192 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 HBG1P69891 147 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 HBG2P69892 147 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF805Q5CZA5 627 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 RBMS3Q6XE24 437 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SSX7Q7RTT5 188 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SMIM15Q7Z3B0 74 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TECPR1Q7Z6L1 1165 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CDCA4Q9BXL8 241 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TAF9BQ9HBM6 251 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 NRXN3Q9Y4C0 1643 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 DDX60LQ5H9U9 1706 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 FEZF1A0PJY2 475 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 GABRR3A8MPY1 467 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ADH5P11766 374 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 RPL17P18621 184 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 OPRD1P41143 372 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 H3F3AP84243 136 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 GPR176Q14439 515 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 UPP1Q16831 310 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 USP50Q70EL3 339 aaPredicted RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 BPIFA2Q96DR5 249 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 F2RL3Q96RI0 385 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 EHFQ9NZC4 300 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SCAF4O95104 1147 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 PTAFRP25105 342 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 PPP2CAP67775 309 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 NPLOC4Q8TAT6 608 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SLC2A12Q8TD20 617 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 NMNAT2Q9BZQ4 307 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF337Q9Y3M9 751 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 OR1A2Q9Y585 309 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 PDCD11Q14690 1871 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SURF4O15260 269 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 BRINP1O60477 761 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CHRNB4P30926 498 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CCR9P51686 369 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 POLR2HP52434 150 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SELENBP1Q13228 472 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TAZQ16635 292 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 LEXMQ3ZCV2 418 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 KANSL1Q7Z3B3 1105 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 ZNF561Q8N587 486 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 KCNRGQ8N5I3 272 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 OR51Q1Q8NH59 317 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TRMT2BQ96GJ1 504 aaKnown RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 MPIG6BO95866 241 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SERPINA5P05154 406 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 TPOP07202 933 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 RD3LP0DJH9 198 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CPN1P15169 458 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 GABRB1P18505 474 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 CTSOP43234 321 aaPredicted RBP8.21□□□□□ -1.1
COL6A6-201ENST00000358511 SRPXP78539 464 aa8.21□□□□□ -1.1
COL6A6-201ENST00000358511 MEX3BQ6ZN04 569 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms