RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TACSTD2P09758 323 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 OR7E24Q6IFN5 339 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 FRRS1Q6ZNA5 592 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 MBOAT2Q6ZWT7 520 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 DHRSXQ8N5I4 330 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 SFXN3Q9BWM7 321 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 GALNT9Q9HCQ5 603 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ZNF639Q9UID6 485 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 F5P12259 2224 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 FAM90A27PA6NNH2 459 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 J3QKU1 62 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 PRG2P13727 222 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 CBLP22681 906 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 GCH1P30793 250 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 OR1E2P47887 323 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 SLC34A1Q06495 639 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ATP6AP1Q15904 470 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ZBED5Q49AG3 693 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 NADK2Q4G0N4 442 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 TMPRSS11AQ6ZMR5 421 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ARHGDIGQ99819 225 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ULBP2Q9BZM5 246 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 S100A14Q9HCY8 104 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 CNOT11Q9UKZ1 510 aaKnown RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 MED26O95402 600 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 WNT3P56703 355 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 CSNK2BP67870 215 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 STK11Q15831 433 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ZNF791Q3KP31 576 aaPredicted RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 SYT14P1Q58G82 188 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ZNF517Q6ZMY9 492 aaPredicted RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 SHFQ7M4L6 423 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 DTWD1Q8N5C7 304 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 TMEM251Q8N6I4 163 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 OR5M1Q8NGP8 315 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 OR6S1Q8NH40 331 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 GPR119Q8TDV5 335 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ADAMTS17Q8TE56 1095 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 SCMH1Q96GD3 660 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ESRP2Q9H6T0 727 aaKnown RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 ELOVL5Q9NYP7 299 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 CXCL13O43927 109 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 PMS2P2O95744 297 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ARR3P36575 388 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 PSG6Q00889 435 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 CAMK2DQ13557 499 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 PON3Q15166 354 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 KLHL22Q53GT1 634 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ARMC4Q5T2S8 1044 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 NPSR1Q6W5P4 371 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 NRMQ8IXM6 262 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 OR2T4Q8NH00 348 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 KISS1RQ969F8 398 aaPredicted RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 TMEM121BQ9BXQ6 578 aaPredicted RBP8.35□□□□□ -1.07
UPF2-202ENST00000357604 SEMA6AQ9H2E6 1030 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 POMPQ9Y244 141 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 B3GALT5Q9Y2C3 310 aa8.35□□□□□ -1.07
UPF2-202ENST00000357604 ZNF814B7Z6K7 855 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 NME4O00746 187 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 HPRP00739 348 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 NPR2P20594 1047 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CTXN1P60606 82 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 MYBPC1Q00872 1141 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 HMGN2P46Q86SG4 172 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 ADCK1Q86TW2 530 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 PACRGLQ8N7B6 248 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CNOT9Q92600 299 aaKnown RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 SPTSSAQ969W0 71 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CTHRC1Q96CG8 243 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 BPIFA2Q96DR5 249 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 ERMAPQ96PL5 475 aaPredicted RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 ZNF300Q96RE9 604 aaPredicted RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 S100A13Q99584 98 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 ANKRA2Q9H9E1 313 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 TRAPPC4Q9Y296 219 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 TIPRLO75663 272 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CT45A8P0DMV1 189 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CT45A9P0DMV2 189 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CT45A2Q5DJT8 189 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 DLEU7Q6UYE1 221 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 TRILQ7L0X0 811 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 OR4N2Q8NGD1 307 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 FAM81AQ8TBF8 368 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 RADILQ96JH8 1075 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CCDC90BQ9GZT6 254 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 DENND2DQ9H6A0 471 aaPredicted RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 SLC22A11Q9NSA0 550 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CLCA1A8K7I4 914 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 SLC15A1P46059 708 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 H3F3CQ6NXT2 135 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 FIP1L1Q6UN15 594 aaKnown RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 APCDD1LQ8NCL9 501 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 TMEM43Q9BTV4 400 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 RBM24Q9BX46 236 aaKnown RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 TSSK6Q9BXA6 273 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 CADM1Q9BY67 442 aaKnown RBP8.34□□□□□ -1.07
UPF2-202ENST00000357604 TMEM72A0PK05 275 aa8.34□□□□□ -1.07
UPF2-202ENST00000357604 ENO4A6NNW6 628 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms