RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SLC29A4Q7RTT9 530 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 METTL21AQ8WXB1 218 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 IL20Q9NYY1 176 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ERGIC3Q9Y282 383 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 TMEM200CA6NKL6 621 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 E9PQ18 207 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 J3QLW9 94 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ZNF264O43296 627 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 LIMS3P0CW19 117 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 LIMS4P0CW20 117 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ZNF19P17023 458 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 EPHA4P54764 986 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SMIM11AP58511 58 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SKP1P63208 163 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 E2F1Q01094 437 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 KLHL26Q53HC5 615 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 TIPARPQ7Z3E1 657 aaKnown RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 SLITRK4Q8IW52 837 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 OR1N1Q8NGS0 311 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 ADAMTS18Q8TE60 1221 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 TMEM80Q96HE8 168 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 UBL7Q96S82 380 aaPredicted RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 WDR77Q9BQA1 342 aaPredicted RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 DUSP23Q9BVJ7 150 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 KLRF1Q9NZS2 232 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 H2AFY2Q9P0M6 372 aaPredicted RBP12.65□□□□□ -0.38
LSS-201ENST00000356396 FBXL2Q9UKC9 423 aa12.65□□□□□ -0.38
LSS-201ENST00000356396 GABARAPL2P60520 117 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 IGLV3-21P80748 117 aaPredicted RBP12.64□□□□□ -0.39
LSS-201ENST00000356396 EIPR1Q53HC9 387 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 RASSF6Q6ZTQ3 369 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 GNRHR2Q96P88 292 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 ZNF160Q9HCG1 818 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 ABCB9Q9NP78 766 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 UBQLN4Q9NRR5 601 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 SLC39A1Q9NY26 324 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 NDUFA13Q9P0J0 144 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 OR6C68A6NDL8 312 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 NPIPB9F8W1W9 429 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 ARFIP1P53367 373 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 IFITM3Q01628 133 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 SKP2Q13309 424 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 COL28A1Q2UY09 1125 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 SLC6A19Q695T7 634 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 DAZLQ92904 295 aaKnown RBP12.64□□□□□ -0.39
LSS-201ENST00000356396 ZNF578Q96N58 590 aaPredicted RBP12.64□□□□□ -0.39
LSS-201ENST00000356396 PPIL3Q9H2H8 161 aaKnown RBP12.64□□□□□ -0.39
LSS-201ENST00000356396 C14orf119Q9NWQ9 140 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 OSGIN1Q9UJX0 560 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 SATB2Q9UPW6 733 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 ROS1P08922 2347 aa12.64□□□□□ -0.39
LSS-201ENST00000356396 IGHV3-15A0A0B4J1V0 119 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 A0A0B4J203 849 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 BHLHE40O14503 412 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 CLPXO76031 633 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 MPZL1O95297 269 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 FCER2P06734 321 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 THBS1P07996 1170 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 FPR3P25089 353 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 RPS19P39019 145 aaKnown RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 PPICP45877 212 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 RELAQ04206 551 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 ARL9Q6T311 187 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 LRRC69Q6ZNQ3 347 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 C17orf47Q8NEP4 570 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 OR4D9Q8NGE8 314 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 OR52L1Q8NGH7 329 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 RAB2BQ8WUD1 216 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 SLC38A2Q96QD8 506 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 ERVMER34-1Q9H9K5 563 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 RHBDL2Q9NX52 303 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 CDH10Q9Y6N8 788 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 A0A1W2PRG6 482 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 CDX4O14627 284 aaPredicted RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 KLF4O43474 513 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 AGR2O95994 175 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 JUNBP17275 347 aaPredicted RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 TCN2P20062 427 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 GAS1P54826 345 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 SERTAD2Q14140 314 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 EXOSC6Q5RKV6 272 aaKnown RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 SLC35D2Q76EJ3 337 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 CDK20Q8IZL9 346 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
LSS-201ENST00000356396 NANSQ9NR45 359 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 FOXJ2Q9P0K8 574 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 BSNQ9UPA5 3926 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 A6NL46 340 aa12.63□□□□□ -0.39
LSS-201ENST00000356396 PRR32B1ATL7 298 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms