RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SVIPQ8NHG7 77 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 BBS10Q8TAM1 723 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 ABHD4Q8TB40 342 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 RAB24Q969Q5 203 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 NECAB3Q96P71 396 aaPredicted RBP14.56□□□□□ -0.08
RTN3-205ENST00000356000 TGM7Q96PF1 710 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SLC35A5Q9BS91 424 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 RIMS4Q9H426 269 aaPredicted RBP14.56□□□□□ -0.08
RTN3-205ENST00000356000 MYOZ1Q9NP98 299 aaPredicted RBP14.56□□□□□ -0.08
RTN3-205ENST00000356000 FAM96BQ9Y3D0 163 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 GGT3PA6NGU5 568 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 IDSB3KWA1 339 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 RNASET2O00584 256 aaKnown RBP14.56□□□□□ -0.08
RTN3-205ENST00000356000 IRAK2O43187 625 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SFTA3P0C7M3 94 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 G0S2P27469 103 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 MAGEB1P43366 347 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SMIM11AP58511 58 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 RSU1Q15404 277 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 TGIF1Q15583 401 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 ELAVL1Q15717 326 aaKnown RBP14.56□□□□□ -0.08
RTN3-205ENST00000356000 KRBOX4Q5JUW0 171 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 ENTPD8Q5MY95 495 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 TRIM40Q6P9F5 258 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SPNS3Q6ZMD2 512 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 GLT6D1Q7Z4J2 308 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 PRO1933Q9H354 126 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 FBXL4Q9UKA2 621 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SMIM28A0A1B0GU29 152 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 hCG_1809904A0A1W2PP81 198 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 A0A1W2PR64 198 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 A0A1W2PRV1 198 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ADH6P28332 368 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 DCTDP32321 178 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 OR2B8PP59922 312 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 HSD11B2P80365 405 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 LY6G6FQ5SQ64 297 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 SDHAF4Q5VUM1 108 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 PAPD4Q6PIY7 484 aaKnown RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 ACOT7LQ6ZUV0 252 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 OR9A2Q8NGT5 310 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 RNF141Q8WVD5 230 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ING5Q8WYH8 240 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 GPA33Q99795 319 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 WRAP53Q9BUR4 548 aaKnown RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 TRIM62Q9BVG3 475 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 SUCNR1Q9BXA5 334 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 SLC32A1Q9H598 525 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 MRPS30Q9NP92 439 aaKnown RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 RPS10P5Q9NQ39 176 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 MAN2C1Q9NTJ4 1040 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 TMEM30AQ9NV96 361 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 TAS2R10Q9NYW0 307 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 FBXL21Q9UKT6 434 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 A0A1W2PPH5 198 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 HHLA1C9JL84 531 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 SEPT4O43236 478 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 OR10H2O60403 315 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 KLHL18O94889 574 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 CRYABP02511 175 aaKnown RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 ACP5P13686 325 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 GNG10P50151 68 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 HMGCS2P54868 508 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 NAE1Q13564 534 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ZDHHC20Q5W0Z9 365 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ADAM5Q6NVV9 412 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 PODNL1Q6PEZ8 512 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ANKRD33Q7Z3H0 272 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 GPR32P1Q8NGA4 272 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 BCO1Q9HAY6 547 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 GULP1Q9UBP9 304 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 RUVBL1Q9Y265 456 aaKnown RBP14.55□□□□□ -0.08
RTN3-205ENST00000356000 TIMM10BQ9Y5J6 103 aa14.55□□□□□ -0.08
RTN3-205ENST00000356000 FRMPD3Q5JV73 1810 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 TRBV23OR9-2A0A075B6M9 112 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 ZNF197O14709 1029 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 AHRP35869 848 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 AKR1C3P42330 323 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 HBA1P69905 142 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 SLC7A9P82251 487 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 TOMM20Q15388 145 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 NKPD1Q17RQ9 610 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 MST1LQ2TV78 715 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 BEX5Q5H9J7 111 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 LIPNQ5VXI9 398 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 FRG2Q64ET8 278 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 BEST3Q8N1M1 668 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 RNF175Q8N4F7 328 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 TCTN2Q96GX1 697 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 FRG2BQ96QU4 278 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 ADGRE3Q9BY15 652 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 RHOFQ9HBH0 211 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 GDF2Q9UK05 429 aaPredicted RBP14.54□□□□□ -0.08
RTN3-205ENST00000356000 ZNF106Q9H2Y7 1883 aaKnown RBP14.54□□□□□ -0.08
RTN3-205ENST00000356000 MOXD2PA6NHM9 499 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 PLPP2O43688 288 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 MOSPD3O75425 235 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 IFNA17P01571 189 aa14.54□□□□□ -0.08
RTN3-205ENST00000356000 PMP2P02689 132 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms