RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 BHLHA15Q7RTS1 189 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 LRRC8CQ8TDW0 803 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 PERPQ96FX8 193 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 CCL19Q99731 98 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 WFDC6Q9BQY6 131 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 CCDC167Q9P0B6 97 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 VAPAQ9P0L0 249 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 HDGFL3Q9Y3E1 203 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 CR1P17927 2039 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 A0A1W2PR80 420 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 POLR3GO15318 223 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 BMP2P12643 396 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 HOXB4P17483 251 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 FPR1P21462 350 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 IL32P24001 234 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC1A3P43003 542 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 CSNK2A1P68400 391 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 TXNL4AP83876 142 aaKnown RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 GLIPR1L2Q4G1C9 344 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 GALNT5Q7Z7M9 940 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF433Q8N7K0 673 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 STEAP2Q8NFT2 490 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 KBTBD8Q8NFY9 601 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 OR52E4Q8NGH9 312 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 AKAP1Q92667 903 aaKnown RBP eCLIP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 KISS1RQ969F8 398 aaPredicted RBP14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 PIP5K1AQ99755 562 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 PRR14Q9BWN1 585 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF385DQ9H6B1 395 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 RMND5AQ9H871 391 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 TMEM181Q9P2C4 612 aa14.76□□□□□ -0.05
PDLIM7-201ENST00000355572 SETD2Q9BYW2 2564 aaPredicted RBP14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 A0A096LPI6 279 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 HS3ST1O14792 307 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 ITGA5P08648 1049 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 ANXA11P50995 505 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 P2RY4P51582 365 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC16A1P53985 500 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 CRISP3P54108 245 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 BSPH1Q075Z2 132 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 SPOCK1Q08629 439 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 PDK3Q15120 406 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 LIN52Q52LA3 116 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 RNF220Q5VTB9 566 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 P3H2Q8IVL5 708 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 PEX5LQ8IYB4 626 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 CADM2Q8N3J6 435 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 TMEM99Q8N816 258 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 ZIC4Q8N9L1 334 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 NFKBIDQ8NI38 313 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 CKAP2Q8WWK9 683 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 C3orf49Q96BT1 292 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 SPDL1Q96EA4 605 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 CCDC28BQ9BUN5 200 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 A4GALTQ9NPC4 353 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 EDARQ9UNE0 448 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 NOSIPQ9Y314 301 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 FLVCR1Q9Y5Y0 555 aa14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 HEATR1Q9H583 2144 aaKnown RBP14.75□□□□□ -0.05
PDLIM7-201ENST00000355572 TRIM64A6NGJ6 449 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TRIM64BA6NI03 449 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 LIPT2A6NK58 231 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TMEM229AB2RXF0 380 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 PDLIM1O00151 329 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF208O43345 1280 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TPST1O60507 370 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SMPD2O60906 423 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 RAD51DO75771 328 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 AKR7A3O95154 331 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 PGM3O95394 542 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TGDSO95455 350 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SOD3P08294 240 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 ARAFP10398 606 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 PTH2RP49190 550 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC25A3Q00325 362 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 LGALS3BPQ08380 585 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 CEACAM7Q14002 265 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SELPLGQ14242 412 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SLC17A1Q14916 467 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 P2RY6Q15077 328 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 STK11Q15831 433 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 AGKQ53H12 422 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 C9orf135Q5VTT2 229 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 C20orf204Q6ZNR8 217 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF100Q8IYN0 542 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 POM121Q96HA1 1249 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 Q96MF0 132 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 ZNF385AQ96PM9 386 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TACO1Q9BSH4 297 aaKnown RBP14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SPATA9Q9BWV2 254 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 POTEKPQ9BYX7 375 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SEC14L4Q9UDX3 406 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 TRAPPC4Q9Y296 219 aa14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 SPIN1Q9Y657 262 aaPredicted RBP14.74□□□□□ -0.05
PDLIM7-201ENST00000355572 A0A0G2JPF8 293 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HNRNPCL2B2RXH8 293 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 SHISA9B4DS77 424 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HNRNPCL3B7ZW38 293 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 CLOCKO15516 846 aa14.73□□□□□ -0.05
PDLIM7-201ENST00000355572 HNRNPCL1O60812 293 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms