RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 KDM4EB2RXH2 506 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 E9PI62 339 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 CSF2RAP15509 400 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 NPBWR1P48145 328 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF74Q16587 644 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RNF151Q2KHN1 245 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 IL20RBQ6UXL0 311 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 OR52E1Q8NGJ3 308 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 GABRQQ9UN88 632 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RIMBP3CA6NJZ7 1639 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RIMBP3BA6NNM3 1639 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RIMBP3Q9UFD9 1639 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 BTN1A1Q13410 526 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 TBCEQ15813 527 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF789Q5FWF6 425 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 FCRLAQ7L513 359 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 NTMT1Q9BV86 223 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 PUS1Q9Y606 427 aaKnown RBP eCLIP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 A0A0B4J2A0 478 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 TMEM82A0PJX8 343 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 KCNK2O95069 426 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 BAXQ07812 192 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RAB6CQ53S08 254 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 Q6ZSR6 202 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 CBLL1Q75N03 491 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 CNEP1R1Q8N9A8 125 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 CHTF18Q8WVB6 975 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 RAB6CQ9H0N0 254 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 SHPKQ9UHJ6 478 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 CAMK2AQ9UQM7 478 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 PCDHGA5Q9Y5G8 931 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 OR52A4PA6NMU1 304 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 GPR39O43194 453 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 B4GAT1O43505 415 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 HBE1P02100 147 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 HLA-DOBP13765 273 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 SPCS2Q15005 226 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 LTB4RQ15722 352 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 OR56B1Q8NGI3 324 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 UBL7Q96S82 380 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 STEAP1Q9UHE8 339 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 ACTL7AQ9Y615 435 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 A8MVM7 634 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 SOCS6O14544 535 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 ITGB7P26010 798 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 INHBCP55103 352 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 OR7E24Q6IFN5 339 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 MCATQ8IVS2 390 aaKnown RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 NRG4Q8WWG1 115 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 LINC01599Q8WXQ3 324 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 PGAP3Q96FM1 320 aaPredicted RBP13.91□□□□□ -0.18
LMX1B-201ENST00000355497 SGPP1Q9BX95 441 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 C1GALT1Q9NS00 363 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 MYOTQ9UBF9 498 aa13.91□□□□□ -0.18
LMX1B-201ENST00000355497 FZD7O75084 574 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 SLC43A1O75387 559 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 ZNF684Q5T5D7 378 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 ATPAF1Q5TC12 328 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 RBMXL3Q8N7X1 1067 aaKnown RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 MDGA1Q8NFP4 955 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 DUSP19Q8WTR2 217 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 SORT1Q99523 831 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 ULBP2Q9BZM5 246 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 METTL17Q9H7H0 456 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 CLDN24A6NM45 220 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 FCGR2AP12318 317 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 MMP12P39900 470 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 AKR1C1Q04828 323 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 LIPIQ6XZB0 460 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 PGAP1Q75T13 922 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 OR4F15Q8NGB8 312 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 ADAM19Q9H013 955 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 CLMPQ9H6B4 373 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 CD63P08962 238 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 EIF2DP41214 584 aaKnown RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 POU3F1Q03052 451 aaPredicted RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 RAB33AQ14088 237 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 RNLSQ5VYX0 342 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 PAPD4Q6PIY7 484 aaKnown RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 OR4A16Q8NH70 328 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 ADOQ96SZ5 270 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 PTTG3PQ9NZH4 202 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 TRAPPC2LQ9UL33 140 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 BET1O15155 118 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 OPN1LWP04000 364 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 M6PRP20645 277 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 IL4RP24394 825 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 PRDX3P30048 256 aaKnown RBP13.9□□□□□ -0.18
LMX1B-201ENST00000355497 PPT1P50897 306 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 SHISA6Q6ZSJ9 500 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 LRRC18Q8N456 261 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 BADQ92934 168 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 BTF3L4Q96K17 158 aa13.9□□□□□ -0.18
LMX1B-201ENST00000355497 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
LMX1B-201ENST00000355497 CPT2P23786 658 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms