RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ADAMTSL4Q6UY14 1074 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 SIMC1Q8NDZ2 872 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 SNX18Q96RF0 628 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MARCH5Q9NX47 278 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 TIMM8AO60220 97 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 ARAFP10398 606 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 LTC4SQ16873 150 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 SLC35F3Q8IY50 421 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 PGBD5Q8N414 524 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 NAV1Q8NEY1 1877 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MDFIC2A0A1B0GVS7 189 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 METTL15A6NJ78 407 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 FANCGO15287 622 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 YKT6O15498 198 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 ALDOBP05062 364 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 ITGAMP11215 1152 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MAOAP21397 527 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 CAMK2DQ13557 499 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 TAZQ16635 292 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 FAM69AQ5T7M9 428 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 BRIX1Q8TDN6 353 aaKnown RBP16.79■□□□□ 0.28
COL18A1-202ENST00000355480 TMIGD2Q96BF3 282 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 SLC6A18Q96N87 628 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 DHRS4Q9BTZ2 278 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 METTL9Q9H1A3 318 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MMP28Q9H239 520 aa16.79■□□□□ 0.28
COL18A1-202ENST00000355480 MYOGP15173 224 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 PDE7AQ13946 482 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 OR6F1Q8NGZ6 308 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ELMOD3Q96FG2 381 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 SPHK1Q9NYA1 384 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 TMEM184BQ9Y519 407 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 KRBA1A5PL33 1030 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 HTR2BP41595 481 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 MISPQ8IVT2 679 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 SLC6A17Q9H1V8 727 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 CALHM2Q9HA72 323 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 CNOT2Q9NZN8 540 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 NME7Q9Y5B8 376 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 LINC01553A4QN01 128 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 SERINC4A6NH21 518 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 H3BMQ9 156 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 NUDT7P0C024 238 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ALDH3B1P43353 468 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 IL13RA1P78552 427 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 MPEG1Q2M385 716 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 THAP10Q9P2Z0 257 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ENPP5Q9UJA9 477 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 A6NIN4 97 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 H0YIV9 168 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 H3BNC9 293 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 RRP8O43159 456 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 CACNG3O60359 315 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 IFNA17P01571 189 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ACP2P11117 423 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 RPS18P62269 152 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 GGTA1PQ4G0N0 100 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF684Q5T5D7 378 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 PAPD4Q6PIY7 484 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 CLEC14AQ86T13 490 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 SPPL3Q8TCT6 385 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 TAAR8Q969N4 342 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 MRPL38Q96DV4 380 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ACKR4Q9NPB9 350 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 URB1O60287 2271 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 H7C1C5 153 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 HPGDSO60760 199 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 CRHBPP24387 322 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 LCN6P62502 163 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 SLC35A1P78382 337 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF169Q14929 603 aaPredicted RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF529Q6P280 563 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 FBXW12Q6X9E4 464 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 KATNB1Q9BVA0 655 aa16.78■□□□□ 0.28
COL18A1-202ENST00000355480 QRSL1Q9H0R6 528 aaKnown RBP16.78■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF593O00488 134 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-202ENST00000355480 HCRTR1O43613 425 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 CCL11P51671 97 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 NKX2-5P52952 324 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SF3A2Q15428 464 aaKnown RBP16.77■□□□□ 0.28
COL18A1-202ENST00000355480 ZFAND1Q8TCF1 268 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 ADAMTS14Q8WXS8 1223 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 DPP4P27487 766 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 LTB4RQ15722 352 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 ZNF808Q8N4W9 903 aaPredicted RBP16.77■□□□□ 0.28
COL18A1-202ENST00000355480 MALSU1Q96EH3 234 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 CMSS1Q9BQ75 279 aaKnown RBP16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SYT11Q9BT88 431 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SEMA6CQ9H3T2 930 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 IL37Q9NZH6 218 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 B4GAT1O43505 415 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 PRAF2O60831 178 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SERPINA7P05543 415 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 EDN3P14138 238 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 OPRL1P41146 370 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 LTBQ06643 244 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 C18orf63Q68DL7 685 aa16.77■□□□□ 0.28
COL18A1-202ENST00000355480 SPARTQ8N0X7 666 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms