RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CBX7O95931 251 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ACTL6AO96019 429 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 PATE4P0C8F1 98 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 KELP23276 732 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 CALRP27797 417 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 ACAA2P42765 397 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 YBEYP58557 167 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 CDC73Q6P1J9 531 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 RBMS3Q6XE24 437 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 RAB2BQ8WUD1 216 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ARL5BQ96KC2 179 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 C9orf16Q9BUW7 83 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 RNF121Q9H920 327 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 KCTD5Q9NXV2 234 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 LRFN1Q9P244 771 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 CDV3Q9UKY7 258 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 A0A1B0GTQ1 180 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 OR6C70A6NIJ9 312 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 KIAA1324LA8MWY0 1029 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 CCNKO75909 580 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 LPLP06858 475 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 DRD2P14416 443 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 JUPP14923 745 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 HIST1H1CP16403 213 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 SOX2P48431 317 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 HGFACQ04756 655 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ZNF177Q13360 481 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 MICAQ29983 383 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 CDONQ4KMG0 1287 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 LY6G6FQ5SQ64 297 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 PLAG1Q6DJT9 500 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 OR52W1Q6IF63 320 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ZNF730Q6ZMV8 503 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 PRSS48Q7RTY5 328 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 FJX1Q86VR8 437 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 PAF1Q8N7H5 531 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 UBASH3BQ8TF42 649 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 C5orf34Q96MH7 638 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ZFP3Q96NJ6 502 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 DOHHQ9BU89 302 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ABHD14AQ9BUJ0 271 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 SLITRK2Q9H156 845 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 OSGEPL1Q9H4B0 414 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 TMEM231Q9H6L2 316 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 KRCC1Q9NPI7 259 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 IMP3Q9NV31 184 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 DHCR7Q9UBM7 475 aaKnown RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 SELENOKQ9Y6D0 94 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 CDH10Q9Y6N8 788 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 SLC22A23A1A5C7 686 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 TRPC5OSA6NMA1 111 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 DLGAP3O95886 979 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 DAOP14920 347 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ZNF267Q14586 743 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 ELMOD2Q8IZ81 293 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 TMEM104Q8NE00 496 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 OR56A4Q8NGH8 313 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 DYRK2Q92630 601 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 TBC1D20Q96BZ9 403 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 C1GALT1C1Q96EU7 318 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 C12orf66Q96MD2 445 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 TRAF4Q9BUZ4 470 aaPredicted RBP5.08□□□□□ -1.6
CD47-201ENST00000355354 PRSS16Q9NQE7 514 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 SPASTQ9UBP0 616 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ZNF229Q9UJW7 825 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 ASF1AQ9Y294 204 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 PADI2Q9Y2J8 665 aa5.08□□□□□ -1.6
CD47-201ENST00000355354 F8VVB4 439 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 F8VWA3 439 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 POLR1CO15160 346 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 ERN1O75460 977 aaKnown RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 CACNG1Q06432 222 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 SLC3A1Q07837 685 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 OR7A5Q15622 319 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 VWA2Q5GFL6 755 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 LRFN4Q6PJG9 635 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ARMC8Q8IUR7 673 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FIBINQ8TAL6 211 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 TFGQ92734 400 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 RORBQ92753 470 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 BORCS5Q969J3 196 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 EMC6Q9BV81 110 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 GABARAPL3Q9BY60 117 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 GSDMCQ9BYG8 508 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 GAREM1Q9H706 876 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FBXL2Q9UKC9 423 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 KRT6AP02538 564 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 KRT6BP04259 564 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 EBLN1P0CF75 366 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 ACP2P11117 423 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 IGFALSP35858 605 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 INSM1Q01101 510 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 FOXE3Q13461 319 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 LANCL3Q6ZV70 420 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 FAM57BQ71RH2 274 aa5.07□□□□□ -1.6
CD47-201ENST00000355354 DMRTC2Q8IXT2 367 aaPredicted RBP5.07□□□□□ -1.6
CD47-201ENST00000355354 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms