RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 APOOLQ6UXV4 268 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RANBP3LQ86VV4 465 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 APLFQ8IW19 511 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 BPIFB2Q8N4F0 458 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 OR4K14Q8NGD5 310 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 MAGEE2Q8TD90 523 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PAQR8Q8TEZ7 354 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ZNRF4Q8WWF5 429 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 C11orf52Q96A22 123 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ISG20Q96AZ6 181 aaKnown RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ZNF501Q96CX3 271 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 SDSLQ96GA7 329 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ALKBH3Q96Q83 286 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 PLIN2Q99541 437 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 C19orf43Q9BQ61 176 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 C6orf106Q9H6K1 298 aaPredicted RBP1.34□□□□□ -2.19
BRCA1-202ENST00000354071 ARMCX1Q9P291 453 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 LNPEPQ9UIQ6 1025 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 RPH3ALQ9UNE2 315 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 DOPEY1Q5JWR5 2465 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 NF1P21359 2839 aa1.34□□□□□ -2.19
BRCA1-202ENST00000354071 CARMIL1Q5VZK9 1371 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TUBAL3A6NHL2 446 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 C15orf61A6NNL5 157 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PMS2P5A8MQ11 134 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ARHGEF33A8MVX0 844 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 F5H6K3 240 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 K7EQD1 137 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 L7N2F9 121 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PRKAB2O43741 272 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 NTN1O95631 604 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 NPPAP01160 153 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 FTH1P02794 183 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 UBTFL1P0CB47 393 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 CPN2P22792 545 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 CDH5P33151 784 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ACVR1BP36896 505 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 LEPP41159 167 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 NAMPTP43490 491 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 XCR1P46094 333 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ATP5J2P56134 94 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ATP5IP56385 69 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ERVFC1-1P60608 527 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SNRPD1P62314 119 aaKnown RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 IL18R1Q13478 541 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 KIAA0141Q14154 515 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TATDN3Q17R31 274 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TRIM16LQ309B1 348 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SCYL2Q6P3W7 929 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 STAC2Q6ZMT1 411 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MOB2Q70IA6 237 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 RUFY3Q7L099 469 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 H2BFWTQ7Z2G1 175 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 NOTCH2NLQ7Z3S9 236 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF596Q8TC21 504 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MAPK15Q8TD08 544 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MIPOL1Q8TD10 442 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SLCO2A1Q92959 643 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MYLPFQ96A32 169 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PRRG3Q9BZD7 231 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PPA2Q9H2U2 334 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 HIPK2Q9H2X6 1198 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ZMAT5Q9UDW3 170 aaKnown RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SCML2Q9UQR0 700 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 CCDC144AA2RUR9 1427 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TOPAZ1Q8N9V7 1692 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TRIOBPQ9H2D6 2365 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 A0A087WW49 117 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 A0A0U1RQS6 177 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 GOLGA8SH3BPF8 625 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SAP18O00422 153 aaKnown RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TAPBPO15533 448 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 SNAP91O60641 907 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 FRAT2O75474 233 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 H6PDO95479 791 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 LGI1O95970 557 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 AGTP01019 485 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 CLTAP09496 248 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TIMP3P35625 211 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 GSK3BP49841 420 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PKNOX1P55347 436 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MERTKQ12866 999 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ZNF154Q13106 437 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 LAGE3Q14657 143 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PVRIGQ6DKI7 326 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM107Q6UX40 140 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 ERI1Q8IV48 349 aaKnown RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 DRAXINQ8NBI3 349 aaPredicted RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 OR52K1Q8NGK4 314 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 OR9A4Q8NGU2 314 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 OR6F1Q8NGZ6 308 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PIBF1Q8WXW3 757 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MS4A14Q96JA4 679 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 OXGR1Q96P68 337 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 TMEM246Q9BRR3 403 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 PARD6BQ9BYG5 372 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 NMRAL1Q9HBL8 299 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 MRPL47Q9HD33 250 aaKnown RBP1.34□□□□□ -2.2
BRCA1-202ENST00000354071 RETNQ9HD89 108 aa1.34□□□□□ -2.2
BRCA1-202ENST00000354071 STAP1Q9ULZ2 295 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms