RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CELA3AP09093 270 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 GALNT4Q8N4A0 578 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 FAM109AQ8N4B1 249 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ATG16L2Q8NAA4 619 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 MAGEE2Q8TD90 523 aaPredicted RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ARHGAP9Q9BRR9 750 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 MFRPQ9BY79 579 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ZDHHC11Q9H8X9 412 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 LHX6Q9UPM6 363 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 TPRP12270 2363 aaKnown RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 FREM3P0C091 2139 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ACOT7O00154 380 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ADAP00813 363 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 SELENBP1Q13228 472 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 PLEKHN1Q494U1 663 aaPredicted RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 WIPI1Q5MNZ9 446 aaPredicted RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 RPUSD3Q6P087 351 aaKnown RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 STK35Q8TDR2 534 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 FAM46AQ96IP4 442 aaKnown RBP24.44■■□□□ 1.5
SSBP4-202ENST00000348495 ACKR4Q9NPB9 350 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 SERINC1Q9NRX5 453 aa24.44■■□□□ 1.5
SSBP4-202ENST00000348495 HTR3EA5X5Y0 456 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 IFI30P13284 250 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 FOXK2Q01167 660 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 SLC6A19Q695T7 634 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 C3orf33Q6P1S2 294 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 TMPRSS11FQ6ZWK6 438 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 MEX3DQ86XN8 651 aaKnown RBP24.43■■□□□ 1.5
SSBP4-202ENST00000348495 BPIFA2Q96DR5 249 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 KTI12Q96EK9 354 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-202ENST00000348495 OR11A1Q9GZK7 315 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF71Q9NQZ8 489 aaPredicted RBP24.43■■□□□ 1.5
SSBP4-202ENST00000348495 TMEM5Q9Y2B1 443 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 ATMQ13315 3056 aa24.43■■□□□ 1.5
SSBP4-202ENST00000348495 DLGAP1O14490 977 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 MAKP20794 623 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 GSSP48637 474 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 GFRA1P56159 465 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 CRYZQ08257 329 aaKnown RBP24.42■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF800Q2TB10 664 aaPredicted RBP eCLIP24.42■■□□□ 1.5
SSBP4-202ENST00000348495 C1QL3Q5VWW1 255 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 CD300LDQ6UXZ3 194 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 GTPBP3Q969Y2 492 aaKnown RBP24.42■■□□□ 1.5
SSBP4-202ENST00000348495 TAAR6Q96RI8 345 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 KRCC1Q9NPI7 259 aaPredicted RBP24.42■■□□□ 1.5
SSBP4-202ENST00000348495 KIF17Q9P2E2 1029 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 MPDZO75970 2070 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 PKD1L2Q7Z442 2459 aa24.42■■□□□ 1.5
SSBP4-202ENST00000348495 ENO4A6NNW6 628 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 POU2F1P14859 743 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 FPR3P25089 353 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 FKBP2P26885 142 aaKnown RBP24.41■■□□□ 1.5
SSBP4-202ENST00000348495 GPR4P46093 362 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 C5orf46Q6UWT4 87 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 GNPDA2Q8TDQ7 276 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 SLC25A43Q8WUT9 341 aaPredicted RBP24.41■■□□□ 1.5
SSBP4-202ENST00000348495 PTDSS2Q9BVG9 487 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 VCXQ9H320 206 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF337Q9Y3M9 751 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 SPIN1Q9Y657 262 aaPredicted RBP24.41■■□□□ 1.5
SSBP4-202ENST00000348495 MITFO75030 526 aaPredicted RBP24.41■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF24P17028 368 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 IGFBP5P24593 272 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 TSPAN31Q12999 210 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 INAQ16352 499 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 C1orf140Q5VVS0 124 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 EXD3Q8N9H8 876 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 DNAJC9Q8WXX5 260 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 TAAR8Q969N4 342 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 PNPLA2Q96AD5 504 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 SFXN2Q96NB2 322 aa24.41■■□□□ 1.5
SSBP4-202ENST00000348495 TRAV36DV7A0A075B6V5 113 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 H0YJX3 145 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 CDC42EP2O14613 210 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 SLC10A1Q14973 349 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 NADK2Q4G0N4 442 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 SYT14P1Q58G82 188 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 SLC46A3Q7Z3Q1 461 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 DDIT4LQ96D03 193 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 SGTBQ96EQ0 304 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 ARL5BQ96KC2 179 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 POTEKPQ9BYX7 375 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF556Q9HAH1 456 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 KRT84Q9NSB2 600 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 POFUT2Q9Y2G5 429 aa24.4■■□□□ 1.5
SSBP4-202ENST00000348495 MED12Q93074 2177 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 MAP1BP46821 2468 aaKnown RBP24.39■■□□□ 1.5
SSBP4-202ENST00000348495 LINC01387J3KSC0 135 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 PEPDP12955 493 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 CHMP24386 653 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 SHC1P29353 583 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 CLK1P49759 484 aaKnown RBP24.39■■□□□ 1.5
SSBP4-202ENST00000348495 AQP4P55087 323 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 RAC1P63000 192 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 COX10Q12887 443 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 ZNF74Q16587 644 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 C19orf48Q6RUI8 117 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 KLHL17Q6TDP4 642 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 CDK20Q8IZL9 346 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 PARP8Q8N3A8 854 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms