RNA–Protein interactions for RNA: ENST00000348462.5

RPL35-201, Transcript of ribosomal protein L35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL35, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-201ENST00000348462 DEF8Q6ZN54 512 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 RBM45Q8IUH3 476 aaKnown RBP13.12□□□□□ -0.31
RPL35-201ENST00000348462 CCDC71Q8IV32 467 aaPredicted RBP13.12□□□□□ -0.31
RPL35-201ENST00000348462 ELOA3Q8NG57 546 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 GEMIN6Q8WXD5 167 aaKnown RBP13.12□□□□□ -0.31
RPL35-201ENST00000348462 SLC47A1Q96FL8 570 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 HSH2DQ96JZ2 352 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 PRR14Q9BWN1 585 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 SRXN1Q9BYN0 137 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 Q9UFV3 132 aa13.12□□□□□ -0.31
RPL35-201ENST00000348462 A8MVM7 634 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 SULT2B1O00204 365 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 GYG2O15488 501 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 PDE5AO76074 875 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 PMS2P2O95744 297 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 TMIGD3P0DMS9 266 aaPredicted RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 PNMTP11086 282 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 MSX2P35548 267 aaPredicted RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 OR1E2P47887 323 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 DIO1P49895 249 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 RAC3P60763 192 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 CBX1P83916 185 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 BNIP1Q12981 228 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 MYBPHQ13203 477 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 IFI44LQ53G44 452 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 SWT1Q5T5J6 900 aaKnown RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 OR2A2Q6IF42 318 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 XKRXQ6PP77 449 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 TMPPEQ6ZT21 453 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 VTCN1Q7Z7D3 282 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 LSRQ86X29 649 aaPredicted RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 NAXEQ8NCW5 288 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 DNAJA3Q96EY1 480 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 ARL5BQ96KC2 179 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 NSMCE2Q96MF7 247 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 POLR2J2Q9GZM3 115 aaKnown RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 PCDHAC1Q9H158 963 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 POLR2J3Q9H1A7 115 aaKnown RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 GORASP2Q9H8Y8 452 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 SAMD4AQ9UPU9 718 aaKnown RBP13.11□□□□□ -0.31
RPL35-201ENST00000348462 LRRK2Q5S007 2527 aa13.11□□□□□ -0.31
RPL35-201ENST00000348462 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 DOPEY1Q5JWR5 2465 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 ZC3H12DA2A288 527 aaKnown RBP13.1□□□□□ -0.31
RPL35-201ENST00000348462 TRAPPC13A5PLN9 417 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 CHP2O43745 196 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 AQP8O94778 261 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 RCBTB2O95199 551 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 IFNW1P05000 195 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 CTSSP25774 331 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 IDUAP35475 653 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 CDH12P55289 794 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 OR2B6P58173 313 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 FKBP9P1Q75LS8 142 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 SLC38A4Q969I6 547 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 SLC7A6OSQ96CW6 309 aaPredicted RBP13.1□□□□□ -0.31
RPL35-201ENST00000348462 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 MUC13Q9H3R2 512 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 RNF122Q9H9V4 155 aa13.1□□□□□ -0.31
RPL35-201ENST00000348462 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
RPL35-201ENST00000348462 FAM90A27PA6NNH2 459 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 DVL2O14641 736 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 DNPH1O43598 174 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 ATP5HO75947 161 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 AHSA1O95433 338 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 CLDN14O95500 239 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 PLGP00747 810 aaPredicted RBP13.09□□□□□ -0.31
RPL35-201ENST00000348462 ENPP1P22413 925 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 TAS2R41P59536 307 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 C1orf140Q5VVS0 124 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 C5orf46Q6UWT4 87 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 FCRLAQ7L513 359 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 TSPYL5Q86VY4 417 aaPredicted RBP13.09□□□□□ -0.31
RPL35-201ENST00000348462 MCEMP1Q8IX19 187 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 RNF128Q8TEB7 428 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 CA5BP1Q8WTZ4 195 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 ROBO4Q8WZ75 1007 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 INTS12Q96CB8 462 aaKnown RBP13.09□□□□□ -0.31
RPL35-201ENST00000348462 CCDC124Q96CT7 223 aaKnown RBP13.09□□□□□ -0.31
RPL35-201ENST00000348462 SLC41A3Q96GZ6 507 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 CLPTM1LQ96KA5 538 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 SFXN3Q9BWM7 321 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 TAPBPLQ9BX59 468 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 SLC7A7Q9UM01 511 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 TRAPPC4Q9Y296 219 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 V9GYQ6 96 aa13.09□□□□□ -0.31
RPL35-201ENST00000348462 IGKV1D-42A0A075B6H8 117 aa13.08□□□□□ -0.32
RPL35-201ENST00000348462 A0A087WUJ7 227 aa13.08□□□□□ -0.32
RPL35-201ENST00000348462 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.32
RPL35-201ENST00000348462 A0A1W2PNV4 684 aa13.08□□□□□ -0.32
RPL35-201ENST00000348462 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.32
RPL35-201ENST00000348462 NPIPB7O75200 414 aa13.08□□□□□ -0.32
RPL35-201ENST00000348462 OR5F1O95221 314 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms