RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PIEZO2Q9H5I5 2752 aa17.14■□□□□ 0.34
CHMP4A-201ENST00000347519 ZNF407Q9C0G0 2248 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 ACOT7O00154 380 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 OR10H3O60404 316 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 NPIPB7O75200 414 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 ZNF24P17028 368 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 MAKP20794 623 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 OMPP47874 163 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 DAPP51397 102 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 GFRA1P56159 465 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 LTBQ06643 244 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 C19orf57Q0VDD7 668 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 GK3PQ14409 553 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 SLC10A1Q14973 349 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 ZDHHC13Q8IUH4 622 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 SIAH3Q8IW03 269 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 AQP11Q8NBQ7 271 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 EME1Q96AY2 570 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 FAM46AQ96IP4 442 aaKnown RBP17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 HS6ST2Q96MM7 605 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 SFXN2Q96NB2 322 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 PSD2Q9BQI7 771 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 PTDSS2Q9BVG9 487 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 QPCTLQ9NXS2 382 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 MED31Q9Y3C7 131 aa17.14■□□□□ 0.33
CHMP4A-201ENST00000347519 ENO4A6NNW6 628 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 EI24O14681 340 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 TFECO14948 347 aaPredicted RBP17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 IFI30P13284 250 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 POU2F1P14859 743 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 ZNF26P17031 533 aaPredicted RBP17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 FUT1P19526 365 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 GPR4P46093 362 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 PTDSS1P48651 473 aaKnown RBP17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 STARP49675 285 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 PRKCDQ05655 676 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 CRYZQ08257 329 aaKnown RBP17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 LY6DQ14210 128 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 FAHD1Q6P587 224 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 TAAR8Q969N4 342 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 ARL5BQ96KC2 179 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 NIPSNAP1Q9BPW8 284 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 PIGQQ9BRB3 760 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 C9orf16Q9BUW7 83 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 OSBPL10Q9BXB5 764 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 ACKR4Q9NPB9 350 aa17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 TMEFF2Q9UIK5 374 aaPredicted RBP17.13■□□□□ 0.33
CHMP4A-201ENST00000347519 SPENQ96T58 3664 aaKnown RBP17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 A8MVM7 634 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 H3BML4 177 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 ZNF208O43345 1280 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 KLF4O43474 513 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 MITFO75030 526 aaPredicted RBP17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SFTPDP35247 375 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 CTBP2P56545 445 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 PPP2R2BQ00005 443 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SELENBP1Q13228 472 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 DAG1Q14118 895 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SNCBQ16143 134 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 C1orf94Q6P1W5 598 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 ZBTB49Q6ZSB9 765 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SLC46A3Q7Z3Q1 461 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 RNF113BQ8IZP6 322 aaKnown RBP17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 GALNT4Q8N4A0 578 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 PIGXQ8TBF5 258 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 STK35Q8TDR2 534 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SMPDL3BQ92485 455 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 GTPBP3Q969Y2 492 aaKnown RBP17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 SLC25A18Q9H1K4 315 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 BOD1L1Q8NFC6 3051 aa17.12■□□□□ 0.33
CHMP4A-201ENST00000347519 BAHCC1Q9P281 2608 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 A0A1W2PNR3 127 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ARRDC5A6NEK1 342 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 H0YC42 278 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 CDC42EP2O14613 210 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ZNHIT1O43257 154 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 BGLAPP02818 100 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 IMPDH2P12268 514 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ELK4P28324 431 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 GCKP35557 465 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 RPS5P46782 204 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ARHGDIAP52565 204 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 TPD52P55327 224 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 CLDN20P56880 219 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ALDH6A1Q02252 535 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 TMEM176BQ3YBM2 270 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 SYT14P1Q58G82 188 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 C1orf140Q5VVS0 124 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 PPP4R4Q6NUP7 873 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 C3orf33Q6P1S2 294 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 RRM2BQ7LG56 351 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 LRRC17Q8N6Y2 441 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 MOGAT1Q96PD6 335 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 SLC19A3Q9BZV2 496 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 SERINC1Q9NRX5 453 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 SPRR3Q9UBC9 169 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 TNFRSF10DQ9UBN6 386 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 ATRXP46100 2492 aa17.11■□□□□ 0.33
CHMP4A-201ENST00000347519 DNAJC13O75165 2243 aa17.1■□□□□ 0.33
CHMP4A-201ENST00000347519 A0A0J9YW62 118 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms