RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 C14orf105Q9NVL8 296 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 OCIAD1Q9NX40 245 aa8.46□□□□□ -1.06
ATG4A-202ENST00000345734 CNOT2Q9NZN8 540 aaKnown RBP8.46□□□□□ -1.06
ATG4A-202ENST00000345734 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 UNC119BA6NIH7 251 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CHP2O43745 196 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 DYRK3O43781 588 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SCRG1O75711 98 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SLC2A10O95528 541 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CER1O95813 267 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CSTAP01040 98 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 NGFRP08138 427 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ZGLP1P0C6A0 271 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 DBTP11182 482 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CKMT1AP12532 417 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 NOS3P29474 1203 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 PSMD4P55036 377 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 FXYD6P3P58550 94 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 PRKCDQ05655 676 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CD226Q15762 336 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 TIGD6Q17RP2 521 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 KLHL26Q53HC5 615 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 TCEAL6Q6IPX3 200 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SLC23A3Q6PIS1 610 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 KIRREL2Q6UWL6 708 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 APOOLQ6UXV4 268 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 HSDL2Q6YN16 418 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ZBTB46Q86UZ6 589 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 RNF113BQ8IZP6 322 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 OR14A16Q8NHC5 309 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 TMEM163Q8TC26 289 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ATOH1Q92858 354 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 OSTF1Q92882 214 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 NINJ1Q92982 152 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 TCEAL3Q969E4 200 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 LCORQ96JN0 433 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 TRIM2Q9C040 744 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ENKD1Q9H0I2 346 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 MOV10Q9HCE1 1003 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SIDT1Q9NXL6 827 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CLEC2DQ9UHP7 191 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 FBXO4Q9UKT5 387 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 RARRES3Q9UL19 164 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SRPK3Q9UPE1 567 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CDH10Q9Y6N8 788 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 C2orf92A0A1B0GVN3 265 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 FRG2CA6NGY1 282 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 POLR1CO15160 346 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 PPM1BO75688 479 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 GABARAPO95166 117 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 APOL3O95236 402 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 UTS2O95399 124 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 IL33O95760 270 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 PIPP12273 146 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CD36P16671 472 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 EBPQ15125 230 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 NKAIN1Q4KMZ8 207 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ALG10BQ5I7T1 473 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SLC25A30Q5SVS4 291 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 LCN10Q6JVE6 187 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CCBE1Q6UXH8 406 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF550Q7Z398 422 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 P2RY8Q86VZ1 359 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 PLPP5Q8NEB5 264 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 OR1N1Q8NGS0 311 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 OR13C2Q8NGS9 318 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 WDR36Q8NI36 951 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 FANK1Q8TC84 345 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 FCGR1BQ92637 280 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 RPL3LQ92901 407 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 DAZLQ92904 295 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 BPIFA2Q96DR5 249 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 OR5M11Q96RB7 305 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 GFM1Q96RP9 751 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 ADOQ96SZ5 270 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 DHRS9Q9BPW9 319 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CDCA4Q9BXL8 241 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 KRCC1Q9NPI7 259 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CGGBP1Q9UFW8 167 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 CFL2Q9Y281 166 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 MED31Q9Y3C7 131 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 RPL36Q9Y3U8 105 aaKnown RBP8.45□□□□□ -1.06
ATG4A-202ENST00000345734 RALGAPA1Q6GYQ0 2036 aa8.45□□□□□ -1.06
ATG4A-202ENST00000345734 SURF4O15260 269 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TSPAN9O75954 239 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 HSMCR30P0CW71 290 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 NAGAP17050 411 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 COL8A1P27658 744 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TGFBR1P36897 503 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 NR0B1P51843 470 aaKnown RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 PGGHGQ32M88 737 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF829Q3KNS6 432 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 FNDC7Q5VTL7 733 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 PAQR6Q6TCH4 344 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 CMIPQ8IY22 773 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TMEM80Q96HE8 168 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 SLC38A2Q96QD8 506 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 KLHDC3Q9BQ90 382 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 RTN4RQ9BZR6 473 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 WWTR1Q9GZV5 400 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms