RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 GAREM2Q75VX8 874 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ERN2Q76MJ5 926 aaKnown RBP7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ZNF680Q8NEM1 530 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 TMEM175Q9BSA9 504 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ADAT1Q9BUB4 502 aaKnown RBP7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ZNF385DQ9H6B1 395 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 SPEGQ15772 3267 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ABCA7Q8IZY2 2146 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ZNF850A8MQ14 1090 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 RHPN2P1A8MT19 583 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 OIP5O43482 229 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 AIFM1O95831 613 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 PMP2P02689 132 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 CSTBP04080 98 aaKnown RBP7.26□□□□□ -1.25
KPNA1-201ENST00000344337 NPPBP16860 134 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 PUS10Q3MIT2 529 aaKnown RBP7.26□□□□□ -1.25
KPNA1-201ENST00000344337 AWAT2Q6E213 333 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ABHD13Q7L211 337 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ZNF283Q8N7M2 679 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 OR52R1Q8NGF1 315 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 OR52E1Q8NGJ3 308 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 OR51S1Q8NGJ8 323 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 OR13C9Q8NGT0 318 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 TMEM163Q8TC26 289 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 STK35Q8TDR2 534 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 CCDC107Q8WV48 283 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 ST8SIA4Q92187 359 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 TMEM168Q9H0V1 697 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 DUSP21Q9H596 190 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 SCP2D1Q9UJQ7 156 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 FBXO4Q9UKT5 387 aa7.26□□□□□ -1.25
KPNA1-201ENST00000344337 DRGXA6NNA5 263 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 NPIPA5E9PKD4 350 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ACP2P11117 423 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 AMY2BP19961 511 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ASCL1P50553 236 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 VEZF1Q14119 521 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 LIMS2Q7Z4I7 341 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 METTL3Q86U44 580 aaKnown RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 MARCH3Q86UD3 253 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 LRRC46Q96FV0 321 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 C6orf106Q9H6K1 298 aaPredicted RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 Q9N2J8 555 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 FANCFQ9NPI8 374 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 KLHL21Q9UJP4 597 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 NPIPA1Q9UND3 350 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CYP8B1Q9UNU6 501 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 MED16Q9Y2X0 877 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 HCFC2Q9Y5Z7 792 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CTNSO60931 367 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 H2BFMP0C1H6 154 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 LAG3P18627 525 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 MVDP53602 400 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 P2RX3P56373 397 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 EIF2S3LQ2VIR3 472 aaKnown RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TCTN3Q6NUS6 607 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 NRROSQ86YC3 692 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ADGRF3Q8IZF5 1079 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 LRRC18Q8N456 261 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TRAM1L1Q8N609 369 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SIMC1Q8NDZ2 872 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TOR1AIP2Q8NFQ8 470 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 OR2A12Q8NGT7 310 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CHAC2Q8WUX2 184 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 RBPMSQ93062 196 aaKnown RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ACOXLQ9NUZ1 547 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SDHAF2Q9NX18 166 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TMPRSS11DO60235 418 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ARHGEF15O94989 841 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 APBB3O95704 486 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TSPAN12O95859 305 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 GNRHRP30968 328 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 HOXA9P31269 272 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TAP2Q03519 686 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 LTBQ06643 244 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SSX1Q16384 188 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 PLK5Q496M5 336 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 FAM209AQ5JX71 171 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 PYHIN1Q6K0P9 492 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ADAM5Q6NVV9 412 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CPEB2Q7Z5Q1 589 aaKnown RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 ASPGQ86U10 573 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CPXM2Q8N436 756 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 MFSD4AQ8N468 514 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CCL4L1Q8NHW4 92 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 C20orf85Q9H1P6 137 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SLC23A2Q9UGH3 650 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 HSPE1-MOB4S4R3N1 261 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 HYKKA2RU49 373 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 UPK1AO00322 258 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SEC14L5O43304 696 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 JUNBP17275 347 aaPredicted RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 CD22P20273 847 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 PGGHGQ32M88 737 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 RNASE10Q5GAN6 216 aaKnown RBP7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TRIM46Q7Z4K8 759 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 GID4Q8IVV7 300 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SGCZQ96LD1 299 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 TAPBPLQ9BX59 468 aa7.25□□□□□ -1.25
KPNA1-201ENST00000344337 SPTAN1Q13813 2472 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms