RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 RIBC2Q9H4K1 309 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 TESQ9UGI8 421 aaKnown RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CARD8Q9Y2G2 431 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 YARS2Q9Y2Z4 477 aaKnown RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 RBMX2Q9Y388 322 aaKnown RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 NOX1Q9Y5S8 564 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 CHCHD2Q9Y6H1 151 aaPredicted RBP13.41□□□□□ -0.26
CXCL12-201ENST00000343575 EML6Q6ZMW3 1958 aa13.41□□□□□ -0.26
CXCL12-201ENST00000343575 IDH3BO43837 385 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 OR5F1O95221 314 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 FADS2O95864 444 aaKnown RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 UBL4AP11441 157 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 HPGDP15428 266 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TCEA1P23193 301 aaKnown RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 MST1P26927 711 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 CLK3P49761 638 aaKnown RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TAS2R41P59536 307 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF117Q03924 483 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 EFR3AQ14156 821 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ZSWIM7Q19AV6 140 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 PLEKHM3Q6ZWE6 761 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 NUP54Q7Z3B4 507 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SNX29P2Q8IUI4 249 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SIRT6Q8N6T7 355 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 LSMEM1Q8N8F7 131 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 OR10G2Q8NGC3 310 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SETD6Q8TBK2 473 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SLC22A8Q8TCC7 542 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 HTRA1Q92743 480 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 KIAA1143Q96AT1 154 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SLC41A3Q96GZ6 507 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SCNM1Q9BWG6 230 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TP63Q9H3D4 680 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF221Q9UK13 617 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ICAM5Q9UMF0 924 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 A0A087WUU8 490 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 A0A1B0GX12 115 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ANKRD34BA5PLL1 514 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF264O43296 627 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TBX1O43435 398 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 NDUFB5O43674 189 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SCO2O43819 266 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 CCNKO75909 580 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TRAPPC2P0DI81 140 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TRAPPC2BP0DI82 140 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SDHBP21912 280 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 CBLP22681 906 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 ARPC4P59998 168 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 RSBN1Q5VWQ0 802 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 RANBP3LQ86VV4 465 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 CCDC103Q8IW40 242 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 TTC9Q92623 222 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 NTNG2Q96CW9 530 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 NIPSNAP1Q9BPW8 284 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 GALNT9Q9HCQ5 603 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SH2D2AQ9NP31 389 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 EXOSC3Q9NQT5 275 aaKnown RBP13.4□□□□□ -0.26
CXCL12-201ENST00000343575 POLE4Q9NR33 117 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 SLC7A7Q9UM01 511 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 RNF6Q9Y252 685 aa13.4□□□□□ -0.26
CXCL12-201ENST00000343575 PIEZO1Q92508 2521 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 A0A1B0GWA3 101 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 TRAPPC13A5PLN9 417 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 C2orf72A6NCS6 295 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 NKX2-8O15522 239 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 WISP1O95388 367 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 GASTP01350 101 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
CXCL12-201ENST00000343575 ST3GAL3Q11203 375 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 DCST1Q5T197 706 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 C6orf183Q5T699 404 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 TMEM255BQ8WV15 326 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 TMCO6Q96DC7 493 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 NXPE2Q96DL1 559 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 THOC3Q96J01 351 aaKnown RBP13.39□□□□□ -0.27
CXCL12-201ENST00000343575 IP6K3Q96PC2 410 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 GPA33Q99795 319 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF559Q9BR84 538 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 TBL1XR1Q9BZK7 514 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 LAT2Q9GZY6 243 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 CNTRLQ7Z7A1 2325 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 SPTBN4Q9H254 2564 aa13.39□□□□□ -0.27
CXCL12-201ENST00000343575 ARRDC5A6NEK1 342 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 E9PQ18 207 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 EFSO43281 561 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 CCNB2O95067 398 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 SOX6P35712 828 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 SMIM11AP58511 58 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 TOMM34Q15785 309 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-201ENST00000343575 TIMM50Q3ZCQ8 353 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 SPANXN2Q5MJ10 180 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ACER2Q5QJU3 275 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF613Q6PF04 617 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 IL20RBQ6UXL0 311 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 ZNF227Q86WZ6 799 aa13.38□□□□□ -0.27
CXCL12-201ENST00000343575 OR4K5Q8NGD3 323 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms