RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 RBP7Q96R05 134 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SLC9B1P1A6NJY1 282 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TMEM212A6NML5 194 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 GABARAPH6UMI1 98 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SCAMP2O15127 329 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 INSIG1O15503 277 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 BUD23O43709 281 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 GABARAPO95166 117 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SCG5P05408 212 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ETV4P43268 484 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 RBP2P50120 134 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ADARB1P78563 741 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 EMX1Q04741 257 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 DCAF12L1Q5VU92 463 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LCN10Q6JVE6 187 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 NAT8LQ8N9F0 302 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR10D4PQ8NGN7 298 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SLC7A6Q92536 515 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PACRGQ96M98 296 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 RBM14Q96PK6 669 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 FBXW11Q9UKB1 542 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF320A2RRD8 509 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 AOC2O75106 756 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PPOXP50336 477 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 CLCN3P51790 818 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 FOXO4P98177 505 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 THEM4Q5T1C6 240 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LEG1Q6P5S2 330 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR2T4Q8NH00 348 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 GPR148Q8TDV2 347 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 FAM216AQ8WUB2 273 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LMF1Q96S06 567 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 NR2E3Q9Y5X4 410 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 MARF1Q9Y4F3 1742 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 TCRBV7S2A1N4TA0A589 114 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TMEM150CB9EJG8 249 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TOX3O15405 576 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 PRICKLE3O43900 615 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 LRCH4O75427 683 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 C1RP00736 705 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 FABP2P12104 132 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 F3P13726 295 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PCGF2P35227 344 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF90Q03938 601 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 GAB1Q13480 694 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 CRMP1Q14194 572 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ATP6V1FQ16864 119 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 BORCS6Q96GS4 357 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 MS4A10Q96PG2 267 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PITX2Q99697 317 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 TXLNGYQ9BZA5 131 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ELP3Q9H9T3 547 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PLEKHA2Q9HB19 425 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.8□□□□□ -1.48
VCAN-203ENST00000343200 C1GALT1Q9NS00 363 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 DNMT3AQ9Y6K1 912 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 A3GALT2U3KPV4 340 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 GPR179Q6PRD1 2367 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 WNT9AO14904 365 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 MAP2K6P52564 334 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 CARD18P57730 90 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PPP1R8Q12972 351 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 ECH1Q13011 328 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LIPJQ5W064 366 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LEMD1Q68G75 181 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 STUMQ69YW2 141 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 IL31RAQ8NI17 732 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 CIB3Q96Q77 187 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 FEVQ99581 238 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PIM2Q9P1W9 311 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF629Q9UEG4 869 aaPredicted RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 IL20RAQ9UHF4 553 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 WNT7AO00755 349 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LAMP1P11279 417 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 LTBQ06643 244 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF534Q76KX8 674 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ZNF34Q8IZ26 560 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PGBD5Q8N414 524 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 IL17RCQ8NAC3 791 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR2M7Q8NG81 312 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR9K2Q8NGE7 335 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR9A4Q8NGU2 314 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 OR2G3Q8NGZ4 309 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 SMPDL3BQ92485 455 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 FYTTD1Q96QD9 318 aaKnown RBP5.8□□□□□ -1.48
VCAN-203ENST00000343200 OSGIN2Q9Y236 505 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 ROBO1Q9Y6N7 1651 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 MYO9AB2RTY4 2548 aa5.8□□□□□ -1.48
VCAN-203ENST00000343200 PTPRMP28827 1452 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 MST1RQ04912 1400 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 TBC1D3BA6NDS4 549 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SCO1O75880 301 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 VIPP01282 170 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 SFTPDP35247 375 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 RARRES1P49788 294 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 PLP2Q04941 152 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CELF3Q5SZQ8 465 aaKnown RBP5.79□□□□□ -1.48
VCAN-203ENST00000343200 CARD17Q5XLA6 110 aa5.79□□□□□ -1.48
VCAN-203ENST00000343200 CA5BP1Q8WTZ4 195 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms