RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 COL13A1Q5TAT6 717 aaPredicted RBP16.58■□□□□ 0.24
SMAD4-201ENST00000342988 TAC4Q86UU9 113 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 PIM3Q86V86 326 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 SLC38A6Q8IZM9 456 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 VAMP8Q9BV40 100 aa16.58■□□□□ 0.24
SMAD4-201ENST00000342988 CLDN7O95471 211 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 FXNQ16595 210 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 HLA-DMAP28067 261 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 GPR19Q15760 415 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CYP1B1Q16678 543 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 TUSC1Q2TAM9 212 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 SLC35E1Q96K37 410 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 A0A1W2PQ09 198 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 ZFP92A6NM28 416 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 BOCQ9BWV1 1114 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CTDSP1Q9GZU7 261 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 SLCO5A1Q9H2Y9 848 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CRLF2Q9HC73 371 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 IL17RBQ9NRM6 502 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 ZDHHC7Q9NXF8 308 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 PMS2P1A4D2B8 440 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 F2P00734 622 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 C4BPAP04003 597 aaKnown RBP16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CEBPEQ15744 281 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 TATDN3Q17R31 274 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF805Q5CZA5 627 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 FRMPD2BQ6IN97 320 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 NPRL2Q8WTW4 380 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CRB3Q9BUF7 120 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 OR51B6Q9H340 312 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 PIGMQ9H3S5 423 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 DEDDO75618 318 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 ACSM1Q08AH1 577 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 GRM7Q14831 915 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 GPR174Q9BXC1 333 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF696Q9H7X3 374 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 OLAHQ9NV23 265 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 KCMF1Q9P0J7 381 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 HHLA2Q9UM44 414 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 DAOAP59103 153 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 TAS2R38P59533 333 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 GPM6BQ13491 265 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMAD4-201ENST00000342988 DBX1A6NMT0 343 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 BET1O15155 118 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 PPP1R8Q12972 351 aaKnown RBP16.57■□□□□ 0.24
SMAD4-201ENST00000342988 CDHR3Q6ZTQ4 885 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 SLC5A8Q8N695 610 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 OR5K2Q8NHB8 316 aa16.57■□□□□ 0.24
SMAD4-201ENST00000342988 OSMP13725 252 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 CA5AP35218 305 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 IQCJQ1A5X6 159 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 BORCS6Q96GS4 357 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 LPAR4Q99677 370 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 KCNQ2O43526 872 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 GCGP01275 180 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 CCKARP32238 428 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 STC1P52823 247 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 UBR1Q8IWV7 1749 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 MEIOCA2RUB1 952 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 NRP1O14786 923 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF623O75123 536 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 TGM1P22735 817 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 VAPAQ9P0L0 249 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ZNF732B4DXR9 585 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 HPGDSO60760 199 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 PPP1R3DO95685 299 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 FBP1P09467 338 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 PSMB2P49721 201 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ADAM5Q6NVV9 412 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 TUSC5Q8IXB3 177 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 GGHQ92820 318 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 GALPQ9UBC7 116 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 POU3F2P20265 443 aaPredicted RBP16.56■□□□□ 0.24
SMAD4-201ENST00000342988 LTBQ06643 244 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 TECTBQ96PL2 329 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 BOKQ9UMX3 212 aaPredicted RBP16.56■□□□□ 0.24
SMAD4-201ENST00000342988 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
SMAD4-201ENST00000342988 SCAMP2O15127 329 aaKnown RBP16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ABOP16442 354 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 PPP2CBP62714 309 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 GRM2Q14416 872 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 FRMD1Q8N878 549 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 SPHK1Q9NYA1 384 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 M6PRP20645 277 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 C2CD4AQ8NCU7 369 aaPredicted RBP16.56■□□□□ 0.24
SMAD4-201ENST00000342988 OR10K1Q8NGX5 313 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ADAMTS14Q8WXS8 1223 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 EGLN3Q9H6Z9 239 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 KPTNQ9Y664 436 aa16.56■□□□□ 0.24
SMAD4-201ENST00000342988 ARFGEF2Q9Y6D5 1785 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
SMAD4-201ENST00000342988 TXNDC12O95881 172 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 RAB33AQ14088 237 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 KEAP1Q14145 624 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 H2BFWTQ7Z2G1 175 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 OR5M8Q8NGP6 311 aa16.55■□□□□ 0.24
SMAD4-201ENST00000342988 CREB3L4Q8TEY5 395 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms