RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZNF443Q9Y2A4 671 aaPredicted RBP11.87□□□□□ -0.51
SIRPB3P-201ENST00000340424 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 A0A1W2PP18 115 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 DEFB108AA8MXU0 73 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 C5orf58C9J3I9 102 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 GPR171O14626 319 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 EDF1O60869 148 aaKnown RBP11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 ADAM11O75078 769 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 FESP07332 822 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 TFPIP10646 304 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 DRD4P21917 467 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 KEAP1Q14145 624 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 GTDC1Q4AE62 458 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 METTL21CQ5VZV1 264 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 ABLIM2Q6H8Q1 611 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 HMGN2P46Q86SG4 172 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 TSPEARQ8WU66 669 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 NRGNQ92686 78 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 SPATA9Q9BWV2 254 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC52A3Q9NQ40 469 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMEM181Q9P2C4 612 aa11.86□□□□□ -0.51
SIRPB3P-201ENST00000340424 ABCA4P78363 2273 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 EVPLLA8MZ36 301 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 AP3D1O14617 1153 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 ETS2P15036 469 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 TACR3P29371 465 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 OR3A2P47893 321 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 SEC24CP53992 1094 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 NR1H2P55055 460 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC35A1P78382 337 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 AGKQ53H12 422 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 BEX5Q5H9J7 111 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 GCNT6Q5T4J0 391 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 WBP2NLQ6ICG8 309 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF836Q6ZNA1 936 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 Q6ZT83 130 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 GALNT5Q7Z7M9 940 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 VRK2Q86Y07 508 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 KRT73Q86Y46 540 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 GABRG1Q8N1C3 465 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF317Q96PQ6 595 aaPredicted RBP11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 SPATA5L1Q9BVQ7 753 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 ADAM19Q9H013 955 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 CCM2LQ9NUG4 571 aaPredicted RBP11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC25A37Q9NYZ2 338 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 OSGIN1Q9UJX0 560 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 ING1Q9UK53 422 aaPredicted RBP11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 PLEKHA6Q9Y2H5 1048 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMED7Q9Y3B3 224 aa11.85□□□□□ -0.51
SIRPB3P-201ENST00000340424 TRBV5-3A0A0A0MS03 114 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 IGHV3-15A0A0B4J1V0 119 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 GCM2O75603 506 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 ATE1O95260 518 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 ARAFP10398 606 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 GPX2P18283 190 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 NCF2P19878 526 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 FPR1P21462 350 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 CXCR1P25024 350 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 PRKAR1BP31321 381 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 SLC16A1P53985 500 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 ITGADQ13349 1161 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 POU4F3Q15319 338 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 ZNF311Q5JNZ3 666 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 SFRP5Q5T4F7 317 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 NUFIP2Q7Z417 695 aaKnown RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 CXorf67Q86X51 503 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 BHLHE22Q8NFJ8 381 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 HSD17B8Q92506 261 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 PIK3IP1Q96FE7 263 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 ARL5BQ96KC2 179 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 NAA11Q9BSU3 229 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 LIME1Q9H400 295 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 TMEM38AQ9H6F2 299 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 NGBQ9NPG2 151 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 RLIMQ9NVW2 624 aa11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 C6orf203Q9P0P8 240 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 LEF1Q9UJU2 399 aaPredicted RBP11.84□□□□□ -0.51
SIRPB3P-201ENST00000340424 HIVEP1P15822 2718 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 F8P00451 2351 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANGPT2O15123 496 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 SIAH2O43255 324 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 PGM3O95394 542 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 IL32P24001 234 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ACAA2P42765 397 aaKnown RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 OR2B6P58173 313 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 H3F3AP84243 136 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 CDK6Q00534 326 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 RPS26P11Q5JNZ5 115 aaPredicted RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 PAGE3Q5JUK9 113 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 GKAP1Q5VSY0 366 aaPredicted RBP11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 ANKRD34AQ69YU3 496 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 REEP3Q6NUK4 255 aa11.83□□□□□ -0.52
SIRPB3P-201ENST00000340424 PAQR6Q6TCH4 344 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms