RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 ADAM10O14672 748 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 CDC40O60508 579 aaKnown RBP eCLIP20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 PRR23D2P0DMB1 279 aaPredicted RBP20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 PEPDP12955 493 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 SLC6A8P48029 635 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 ITGADQ13349 1161 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 BTBD16Q32M84 506 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 ATCAYQ86WG3 371 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 OR4K13Q8NH42 304 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 OR5W2Q8NH69 310 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 ZHX1-C8orf76Q96EF9 292 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 ADAM19Q9H013 955 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 OSGIN1Q9UJX0 560 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 LOXL2Q9Y4K0 774 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 FREM2Q5SZK8 3169 aa20.43■□□□□ 0.86
PDLIM2-203ENST00000339162 RIIAD1A6NNX1 92 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 EIF4E2O60573 245 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 OR2J2O76002 312 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 NADKO95544 446 aaPredicted RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 SCG5P05408 212 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 LIMS3P0CW19 117 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 LIMS4P0CW20 117 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 CCKBRP32239 447 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 ENTPD1P49961 510 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 RPS7P62081 194 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 LTBQ06643 244 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 RNLSQ5VYX0 342 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 SDR9C7Q8NEX9 313 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 OR52E2Q8NGJ4 325 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 MOSPD2Q8NHP6 518 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 SLC19A3Q9BZV2 496 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 KLHL1Q9NR64 748 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 CHCHD3Q9NX63 227 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 ZNF337Q9Y3M9 751 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 C9J4A7 227 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 ZFAND5O76080 213 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 HIST1H1CP16403 213 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 C1DQ13901 141 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 ZNF74Q16587 644 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 C1QL3Q5VWW1 255 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 MEPCEQ7L2J0 689 aaKnown RBP20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 NAXDQ8IW45 347 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 FN3KQ9H479 309 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 MYOTQ9UBF9 498 aa20.42■□□□□ 0.86
PDLIM2-203ENST00000339162 A0A1B0GVG6 124 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 B4DXG7 233 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 HK1P19367 917 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 PGCP20142 388 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 RPS5P46782 204 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 P2RX1P51575 399 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 CBFBQ13951 182 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 PCOLCEQ15113 449 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 QPRTQ15274 297 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 TMEM44Q2T9K0 475 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 LIPKQ5VXJ0 399 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 OR5L2Q8NGL0 311 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 OR9Q1Q8NGQ5 310 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 DYNC2LI1Q8TCX1 351 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 SECISBP2Q96T21 854 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 TMEM43Q9BTV4 400 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 NANSQ9NR45 359 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 CHRNA9Q9UGM1 479 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 NXT1Q9UKK6 140 aaKnown RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 COL27A1Q8IZC6 1860 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 SERPINI2O75830 405 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 CLPXO76031 633 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 ZNF3P17036 446 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 CXCR1P25024 350 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 AQP2P41181 271 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 COL28A1Q2UY09 1125 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 GID4Q8IVV7 300 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 B4GALNT2Q8NHY0 566 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 SMAP2Q8WU79 429 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 TM9SF4Q92544 642 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 TAAR8Q969N4 342 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 LRFN5Q96NI6 719 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 TBX5Q99593 518 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 DCSTAMPQ9H295 470 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 MMP25Q9NPA2 562 aa20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 AKAP7Q9P0M2 348 aaPredicted RBP20.41■□□□□ 0.86
PDLIM2-203ENST00000339162 IRGMA1A4Y4 181 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 MASP2O00187 686 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 IMPA2O14732 288 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 LRRTM2O43300 516 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 MRPL3P09001 348 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 PAICSP22234 425 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 WNT4P56705 351 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 ERVK-25P63136 954 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 EFR3AQ14156 821 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 DCAF12Q5T6F0 453 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 ZNF517Q6ZMY9 492 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 FAM98AQ8NCA5 519 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 GPR119Q8TDV5 335 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 KISS1RQ969F8 398 aaPredicted RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 DEFB126Q9BYW3 111 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 TNFRSF10DQ9UBN6 386 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 EXOGQ9Y2C4 368 aaKnown RBP20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 PCDHGA3Q9Y5H0 932 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 PMF1-BGLAPU3KQ54 211 aa20.4■□□□□ 0.86
PDLIM2-203ENST00000339162 STK17BO94768 372 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms