RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SLC6A5Q9Y345 797 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 RTTNQ86VV8 2226 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 TEX13CA0A0J9YWL9 993 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 OR6C68A6NDL8 312 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 PRR32B1ATL7 298 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CDC40O60508 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
SNCA-201ENST00000336904 CTNSO60931 367 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ICOSLGO75144 302 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 COQ9O75208 318 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 IL1AP01583 271 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 OPN1LWP04000 364 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SBK2P0C263 348 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 PSKH1P11801 424 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ZNF3P17036 446 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ELK1P19419 428 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 RPS5P46782 204 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 CCR5P51681 352 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SLC25A30Q5SVS4 291 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 MARCH3Q86UD3 253 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 KDM8Q8N371 416 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SAMD12Q8N8I0 201 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SLC25A36Q96CQ1 311 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 TTYH2Q9BSA4 534 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 UBE2ZQ9H832 354 aaPredicted RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 PDE7BQ9NP56 450 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 KRCC1Q9NPI7 259 aaPredicted RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 CMC2Q9NRP2 79 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 BABAM2Q9NXR7 383 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CTSFQ9UBX1 484 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 NUFIP1Q9UHK0 495 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 SDK2Q58EX2 2172 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 PRRC2CQ9Y520 2896 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 A0A075B6Q4 140 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 A0A0B4J293 547 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SERINC4A6NH21 518 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SMLR1H3BR10 107 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 DCTN6O00399 190 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 RCBTB2O95199 551 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 IGHA1P01876 353 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SRFP11831 508 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 NME1P15531 152 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 MST1P26927 711 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CSF2RBP32927 897 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SRP9P49458 86 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 NR0B1P51843 470 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 CLDN12P56749 244 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CD83Q01151 205 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ZNF517Q6ZMY9 492 aaPredicted RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 Q8N402 240 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 OR8K3Q8NH51 312 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 OR1L3Q8NH93 324 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ZNF563Q8TA94 476 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 PTPMT1Q8WUK0 201 aaPredicted RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 GHSRQ92847 366 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 FYTTD1Q96QD9 318 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 NPAS1Q99742 590 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ANKRD19PQ9H560 264 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 NLKQ9UBE8 527 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 RASD1Q9Y272 281 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 MRPS33Q9Y291 106 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 FRYQ5TBA9 3013 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CACNA1EQ15878 2313 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 ACOD1A6NK06 481 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PLA2G10O15496 165 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 HCN1O60741 890 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PRAMEF2O60811 474 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PTP4A3O75365 173 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 PTTG1O95997 202 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CLPSP04118 112 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 EIF4EP06730 217 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 PTHLHP12272 177 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 SNRPBP14678 240 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 GLULP15104 373 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CENPAP49450 140 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.1□□□□□ -1.11
SNCA-201ENST00000336904 SF3B4Q15427 424 aaKnown RBP eCLIP8.1□□□□□ -1.11
SNCA-201ENST00000336904 NSDHLQ15738 373 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 GLYR1Q49A26 553 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 ZNF57Q68EA5 555 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 TUBA3EQ6PEY2 450 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 TMPRSS9Q7Z410 1059 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 BMPERQ8N8U9 685 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 OR5H6Q8NGV6 325 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 KTI12Q96EK9 354 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 TCTN2Q96GX1 697 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 OR14A2Q96R54 314 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 SP140LQ9H930 580 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CUTCQ9NTM9 273 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 MRPL15Q9P015 296 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 EXTL2Q9UBQ6 330 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 MKL2Q9ULH7 1088 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 EXOGQ9Y2C4 368 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 AK6Q9Y3D8 172 aaKnown RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 IQCMA0A1B0GVH7 501 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 A0A1W2PR77 199 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 CPED1A4D0V7 1026 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 METTL12A8MUP2 240 aa8.1□□□□□ -1.11
SNCA-201ENST00000336904 POLR1CO15160 346 aaPredicted RBP8.1□□□□□ -1.11
SNCA-201ENST00000336904 HCRTR2O43614 444 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms