RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 HBMQ6B0K9 141 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 WDR88Q6ZMY6 472 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ESPNLQ6ZVH7 1005 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 PIWIL3Q7Z3Z3 882 aaKnown RBP12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 NKAIN4Q8IVV8 208 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 OFCC1Q8IZS5 231 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 STK35Q8TDR2 534 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 OSTF1Q92882 214 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ADGRG7Q96K78 797 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ARL5BQ96KC2 179 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 PIP5K1AQ99755 562 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 TUBA1CQ9BQE3 449 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRSS27Q9BQR3 290 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 TINAGQ9UJW2 476 aa12.66□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZGRF1Q86YA3 2104 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 IGKV1D-42A0A075B6H8 117 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 FIGNL2A6NMB9 653 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 CXCL13O43927 109 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 WDR1O75083 606 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRSS23O95084 383 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 GABRA1P14867 456 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 FUT4P22083 530 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 MAGEA2P43356 314 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 CARD18P57730 90 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 SPIBQ01892 262 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 EGR4Q05215 589 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 MYBPHQ13203 477 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 KPNB1Q14974 876 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 TRAM2Q15035 370 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 SGCBQ16585 318 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 C1QL3Q5VWW1 255 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 TTC33Q6PID6 262 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 LINC00114Q6XXX2 140 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 C3P1Q6ZMU1 363 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 PIK3C3Q8NEB9 887 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR10D3Q8NH80 312 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 PRR7Q8TB68 274 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZPLD1Q8TCW7 415 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF845Q96IR2 970 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHID1Q9BWS9 393 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 POTEKPQ9BYX7 375 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 TP63Q9H3D4 680 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 COQ10BQ9H8M1 238 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 NMNAT1Q9HAN9 279 aaPredicted RBP12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 TESMINQ9Y4I5 508 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 CFAP46Q8IYW2 2715 aa12.65□□□□□ -0.38
APOBEC3B-202ENST00000335760 CLCA1A8K7I4 914 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 PYCARD-AS1I3L0S3 204 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 SULT2B1O00204 365 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 NPIPB7O75200 414 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 H1F0P07305 194 aaKnown RBP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 IMPDH2P12268 514 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 ACVR2AP27037 513 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 IDUAP35475 653 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 CA7P43166 264 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 DIO1P49895 249 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 OR2B6P58173 313 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 ACTR3P61158 418 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 SF3B4Q15427 424 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 ACSF3Q4G176 576 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 C1orf185Q5T7R7 199 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 C1orf140Q5VVS0 124 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 PPP4R4Q6NUP7 873 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMPPEQ6ZT21 453 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMEM255BQ8WV15 326 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 SLCO4A1Q96BD0 722 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 KTI12Q96EK9 354 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 TMEM43Q9BTV4 400 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 MAN2C1Q9NTJ4 1040 aa12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 CCM2LQ9NUG4 571 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
APOBEC3B-202ENST00000335760 TRAV36DV7A0A075B6V5 113 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 KDM4EB2RXH2 506 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 KPNA4O00629 521 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 FKBP6O75344 327 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 GADD45GO95257 159 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 AHSA1O95433 338 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 SYNGR4O95473 234 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 PMS2P2O95744 297 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 STSP08842 583 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 HOXD4P09016 255 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 HOXB6P17509 224 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 RRM2P31350 389 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 PTGER4P35408 488 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 RBM34P42696 430 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 RPS5P46782 204 aaKnown RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 UGT2B15P54855 530 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 SMIM11AP58511 58 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 CSNK2A1P68400 391 aaPredicted RBP12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 FGD3Q5JSP0 725 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 C5orf46Q6UWT4 87 aa12.63□□□□□ -0.39
APOBEC3B-202ENST00000335760 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms