RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 KLF15Q9UIH9 416 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 GSTK1Q9Y2Q3 226 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 PIAS3Q9Y6X2 628 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 C7orf66A4D0T2 115 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 CDC123O75794 336 aaPredicted RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 EIF4EP06730 217 aaKnown RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 SHC2P98077 582 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 OC90Q02509 493 aaPredicted RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 FCRLBQ6BAA4 426 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 FCRL6Q6DN72 434 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 FIGLAQ6QHK4 219 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 SLC16A13Q7RTY0 426 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 RELL2Q8NC24 303 aaPredicted RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 OR4Q3Q8NH05 313 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 ABHD1Q96SE0 405 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 ADAT1Q9BUB4 502 aaKnown RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
SF1-202ENST00000334944 MED20Q9H944 212 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 ZSCAN32Q9NX65 697 aa12.83□□□□□ -0.36
SF1-202ENST00000334944 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 RAB19A4D1S5 217 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 TNFRSF4P43489 277 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 CDK5Q00535 292 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 PLK5Q496M5 336 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 Q6ZSR6 202 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 FAM26EQ8N5C1 309 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SAMD12Q8N8I0 201 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ZNF454Q8N9F8 522 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 OR4K14Q8NGD5 310 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 FLVCR1-AS1Q8TAF5 88 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SMAP2Q8WU79 429 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 GAL3ST3Q96A11 431 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SECISBP2Q96T21 854 aaKnown RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 TBX5Q99593 518 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 GABRG3Q99928 467 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 POLDIP3Q9BY77 421 aaKnown RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 ENKD1Q9H0I2 346 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 PLCL2Q9UPR0 1127 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ALPK2Q86TB3 2170 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 H0YGG7 62 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 L7N2F9 121 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 FGF17O60258 216 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 PRKNO60260 465 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 PIPP12273 146 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 CPEP16870 476 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 NT5EP21589 574 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ANXA11P50995 505 aaKnown RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 ARF3P61204 181 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 TNFRSF17Q02223 184 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ZNF791Q3KP31 576 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 TMEM201Q5SNT2 666 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SFRP4Q6FHJ7 346 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 Q6ZTK2 550 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ESPNLQ6ZVH7 1005 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 OVCH2Q7RTZ1 564 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 GDF7Q7Z4P5 450 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ZNF764Q96H86 408 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 SLC22A11Q9NSA0 550 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 COA4Q9NYJ1 87 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 NDOR1Q9UHB4 597 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 POMT2Q9UKY4 750 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 MEIKINA0A087WXM9 373 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 UBXN7O94888 489 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ACP2P11117 423 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 MEOX2P50222 304 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 RPS15AP62244 130 aaKnown RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 TRAM2Q15035 370 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 CDC73Q6P1J9 531 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 ZNF836Q6ZNA1 936 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SLC41A3Q96GZ6 507 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 DPAGT1Q9H3H5 408 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 DAPP1Q9UN19 280 aa12.82□□□□□ -0.36
SF1-202ENST00000334944 SF3B6Q9Y3B4 125 aaKnown RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 KLF2Q9Y5W3 355 aaPredicted RBP12.82□□□□□ -0.36
SF1-202ENST00000334944 A8MXK9 166 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 TO15178 435 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 CASC3O15234 703 aaKnown RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 RAB36O95755 333 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 TEAD1P28347 426 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 ATP6V1E1P36543 226 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 OMPP47874 163 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 MTNR1AP48039 350 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 HOXA1P49639 335 aaPredicted RBP12.81□□□□□ -0.36
SF1-202ENST00000334944 C3orf38Q5JPI3 329 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 PDSS1Q5T2R2 415 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 QSOX2Q6ZRP7 698 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 SIAH3Q8IW03 269 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 BVESQ8NE79 360 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 PFN4Q8NHR9 129 aa12.81□□□□□ -0.36
SF1-202ENST00000334944 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms