RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TAAR6Q96RI8 345 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 OSBPL10Q9BXB5 764 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 OR11A1Q9GZK7 315 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 MED31Q9Y3C7 131 aa19.43■□□□□ 0.7
TPM1-204ENST00000334895 NPIPB7O75200 414 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 C1QL3Q5VWW1 255 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 FAM109AQ8N4B1 249 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 FAM98AQ8NCA5 519 aaKnown RBP19.42■□□□□ 0.7
TPM1-204ENST00000334895 SDCCAG3Q96C92 435 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 NIPSNAP1Q9BPW8 284 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 ZDHHC11Q9H8X9 412 aa19.42■□□□□ 0.7
TPM1-204ENST00000334895 TMEFF2Q9UIK5 374 aaPredicted RBP19.42■□□□□ 0.7
TPM1-204ENST00000334895 SPENQ96T58 3664 aaKnown RBP19.41■□□□□ 0.7
TPM1-204ENST00000334895 ALPLP05186 524 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 SHC1P29353 583 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 PRKCDQ05655 676 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 DAG1Q14118 895 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 C1orf94Q6P1W5 598 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 LINC00471Q8N535 108 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 PIGXQ8TBF5 258 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 RELTQ969Z4 430 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 KTI12Q96EK9 354 aaPredicted RBP19.41■□□□□ 0.7
TPM1-204ENST00000334895 FAM46AQ96IP4 442 aaKnown RBP19.41■□□□□ 0.7
TPM1-204ENST00000334895 PIGQQ9BRB3 760 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 SLC19A3Q9BZV2 496 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 QPCTLQ9NXS2 382 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 USE1Q9NZ43 259 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 LUZP4Q9P127 313 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 FAM208BQ5VWN6 2430 aa19.41■□□□□ 0.7
TPM1-204ENST00000334895 TLN1Q9Y490 2541 aaKnown RBP19.41■□□□□ 0.7
TPM1-204ENST00000334895 ENO4A6NNW6 628 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ACOT7O00154 380 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ZNF208O43345 1280 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 KLF4O43474 513 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 IFI30P13284 250 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 POU2F1P14859 743 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 MAKP20794 623 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ELK4P28324 431 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 GPR4P46093 362 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 GFRA1P56159 465 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 CTBP2P56545 445 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 CRYZQ08257 329 aaKnown RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 KDM4DQ6B0I6 523 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 RRM2BQ7LG56 351 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 GALNT4Q8N4A0 578 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 PTDSS2Q9BVG9 487 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 KLHL4Q9C0H6 718 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 SLC6A15Q9H2J7 730 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 TMEM185BQ9H7F4 350 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ZNF337Q9Y3M9 751 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 LIPGQ9Y5X9 500 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 A8MVM7 634 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 LRRN3E7EW58 273 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 PEPDP12955 493 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ANXA8P13928 327 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ZNF24P17028 368 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ALDH3A2P51648 485 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 SELENBP1Q13228 472 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 RPUSD3Q6P087 351 aaKnown RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 C3orf33Q6P1S2 294 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ATG16L2Q8NAA4 619 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ATP6V1C2Q8NEY4 427 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 MAGEE2Q8TD90 523 aaPredicted RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 GTPBP3Q969Y2 492 aaKnown RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 DNAJA3Q96EY1 480 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ARL5BQ96KC2 179 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 SFXN2Q96NB2 322 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 RBM4BQ9BQ04 359 aaKnown RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 RBM4Q9BWF3 364 aaKnown RBP19.4■□□□□ 0.7
TPM1-204ENST00000334895 DGCR6LQ9BY27 220 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ACKR4Q9NPB9 350 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 MGAT4BQ9UQ53 548 aa19.4■□□□□ 0.7
TPM1-204ENST00000334895 ZNF407Q9C0G0 2248 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 H3BML4 177 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 DLGAP1O14490 977 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 CDC42EP2O14613 210 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 MITFO75030 526 aaPredicted RBP19.39■□□□□ 0.69
TPM1-204ENST00000334895 WISP2O76076 250 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 OPN1LWP04000 364 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 LTBQ06643 244 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 C19orf57Q0VDD7 668 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 CMPK2Q5EBM0 449 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 Q8NA96 180 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 STK35Q8TDR2 534 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 TAAR8Q969N4 342 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 PNPLA2Q96AD5 504 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 BPIFA2Q96DR5 249 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 BBC3Q96PG8 261 aaPredicted RBP19.39■□□□□ 0.69
TPM1-204ENST00000334895 DEFB127Q9H1M4 99 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 SERINC1Q9NRX5 453 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 SLC6A5Q9Y345 797 aa19.39■□□□□ 0.69
TPM1-204ENST00000334895 HPRP00739 348 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 ADAP00813 363 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 IGF2P01344 180 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 FUT1P19526 365 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 VHLP40337 213 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 GSSP48637 474 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 MAP2K6P52564 334 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 SLC10A1Q14973 349 aa19.38■□□□□ 0.69
TPM1-204ENST00000334895 SYT14P1Q58G82 188 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms