RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 POLE3Q9NRF9 147 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM269A0A1B0GVZ9 245 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 ANKRD30BLA7E2S9 258 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 H7C1C5 153 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 DSCR3O14972 297 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 SCGNO76038 276 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 NPR2P20594 1047 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 LCN6P62502 163 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 EIF5AP63241 154 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TMEM244Q5VVB8 128 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 PGM2L1Q6PCE3 622 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 Q6ZPB1 254 aaPredicted RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 SSX6Q7RTT6 188 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 MINDY2Q8NBR6 621 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 ASB12Q8WXK4 309 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 STACQ99469 402 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 MYEF2Q9P2K5 600 aaKnown RBP13.91□□□□□ -0.18
C9orf47-201ENST00000334490 TAF1LQ8IZX4 1826 aa13.91□□□□□ -0.18
C9orf47-201ENST00000334490 CD22P20273 847 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 CFL1P23528 166 aaKnown RBP13.9□□□□□ -0.18
C9orf47-201ENST00000334490 RGS6P49758 472 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 CEBPGP53567 150 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 XKRXQ6PP77 449 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MFSD8Q8NHS3 518 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 THAP6Q8TBB0 222 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 CPT1CQ8TCG5 803 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 SP7Q8TDD2 431 aaPredicted RBP13.9□□□□□ -0.18
C9orf47-201ENST00000334490 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 CORINQ9Y5Q5 1042 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 OR2AT4A6NND4 320 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 FAM166BA8MTA8 275 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 C3orf33Q6P1S2 294 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MBOAT2Q6ZWT7 520 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 SLC37A3Q8NCC5 494 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 SMRP1Q8NCR6 262 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 RSPRY1Q96DX4 576 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 LHPPQ9H008 270 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 IGHV1OR15-9A0A0B4J2B8 117 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 B4GAT1O43505 415 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 KLK8O60259 260 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MPIG6BO95866 241 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 GNAO1P09471 354 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MAGEA2P43356 314 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 LRRC18Q8N456 261 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 DNAAF1Q8NEP3 725 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 IP6K3Q96PC2 410 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 DNTTIP1Q9H147 329 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 HHLA2Q9UM44 414 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 PPIL1Q9Y3C6 166 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 GVINP1Q7Z2Y8 2422 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MEN1O00255 615 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 ARHGAP33O14559 1287 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 DIRAS3O95661 229 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 TSPAN12O95859 305 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 FAM53BQ14153 422 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 MEPEQ9NQ76 525 aaPredicted RBP13.9□□□□□ -0.18
C9orf47-201ENST00000334490 DNAJB11Q9UBS4 358 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 PFDN2Q9UHV9 154 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 AK6Q9Y3D8 172 aaKnown RBP13.9□□□□□ -0.18
C9orf47-201ENST00000334490 ST14Q9Y5Y6 855 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 CACNA1CQ13936 2221 aa13.9□□□□□ -0.18
C9orf47-201ENST00000334490 FXYD6-FXYD2A0A087WZ82 144 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 NRG2O14511 850 aaPredicted RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 EIF1BO60739 113 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 POU2F2P09086 479 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 GSTT2P0CG29 244 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 ENPP1P22413 925 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 DRD3P35462 400 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CDK10Q15131 360 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SLC25A25Q6KCM7 469 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SFTPA1Q8IWL2 248 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 OR4F15Q8NGB8 312 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 ZNF417Q8TAU3 575 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 C4orf36Q96KX1 117 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 FXYD6Q9H0Q3 95 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 C14orf119Q9NWQ9 140 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 C4orf47A7E2U8 309 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 INMT-MINDY4F8WBC2 141 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CPEB2Q7Z5Q1 589 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CMIPQ8IY22 773 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CA13Q8N1Q1 262 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 TRMT10AQ8TBZ6 339 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CHST8Q9H2A9 424 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 NUDT15Q9NV35 164 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 TRAV18A0A075B6X5 111 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 FAM230AA0A1W2PPH8 454 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 A8MVM7 634 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 EEF1E1-BLOC1S5C9J1V9 151 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 NUDT21O43809 227 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 POLR2IP36954 125 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 PSPHP78330 225 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 CD83Q01151 205 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
C9orf47-201ENST00000334490 FZD2Q14332 565 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 TRAPPC6BQ86SZ2 158 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 OR5L1Q8NGL2 311 aa13.89□□□□□ -0.19
C9orf47-201ENST00000334490 ELOVL3Q9HB03 270 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms