RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM138Q9NPI0 162 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 KIAA1671Q9BY89 1806 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 WASH3PC4AMC7 463 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 EMC8O43402 210 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 CD53P19397 219 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 MPIP34949 423 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 FOXK2Q01167 660 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 CRMP1Q14194 572 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 MLC1Q15049 377 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ALKBH2Q6NS38 261 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 TMUB2Q71RG4 321 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PARS2Q7L3T8 475 aaKnown RBP12.7□□□□□ -0.38
SYNE3-201ENST00000334258 OVCH2Q7RTZ1 564 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 DTD2Q96FN9 168 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 PDCD1LG2Q9BQ51 273 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 DPEP2Q9H4A9 486 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 WDR45Q9Y484 360 aa12.7□□□□□ -0.38
SYNE3-201ENST00000334258 TRBV2A0A0J9YWF9 115 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 A0A1W2PR48 441 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 SUSD5O60279 629 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 SDC3O75056 442 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ADAM11O75078 769 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 RHOP08100 348 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 HSD17B2P37059 387 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 NAA10P41227 235 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 FNTBP49356 437 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 METAP1P53582 386 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 EPHA4P54764 986 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 RIPPLY1Q0D2K3 151 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 CAMK1Q14012 370 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 LTB4RQ15722 352 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 LINC00303Q3SY05 128 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ATRAIDQ6UW56 229 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ADIPOR2Q86V24 386 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 AMZ2Q86W34 360 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 SFTPA1Q8IWL2 248 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 BVESQ8NE79 360 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 FAM71CQ8NEG0 241 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 EPHX3Q9H6B9 360 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 XKR8Q9H6D3 395 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 PELI2Q9HAT8 420 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 NPDC1Q9NQX5 325 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 INPP5EQ9NRR6 644 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 GPR160Q9UJ42 338 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 CA5BQ9Y2D0 317 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 TRAV27A0A087WT01 109 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 LILRB3O75022 631 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 MAKP20794 623 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ZNF85Q03923 595 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 GK2Q14410 553 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 UBE2NLQ5JXB2 153 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 LY6G5CQ5SRR4 150 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM215Q68D42 235 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 GLDNQ6ZMI3 551 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 THSD4Q6ZMP0 1018 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 SSX6Q7RTT6 188 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ARL14Q8N4G2 192 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 HDDC3Q8N4P3 179 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 BRIX1Q8TDN6 353 aaKnown RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 DOK4Q8TEW6 326 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 NUS1Q96E22 293 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 ZMYND19Q96E35 227 aaPredicted RBP12.69□□□□□ -0.38
SYNE3-201ENST00000334258 SARGQ9BW04 601 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 GNG8Q9UK08 70 aa12.69□□□□□ -0.38
SYNE3-201ENST00000334258 A8MXK9 166 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 KLF4O43474 513 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 GSTZ1O43708 216 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 LILRB5O75023 590 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RCBTB2O95199 551 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 S100A6P06703 90 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 SELLP14151 372 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 EDNRAP25101 427 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 DCTDP32321 178 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 UBE2MP61081 183 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 SLC7A9P82251 487 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 SGCAQ16586 387 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TCEAL5Q5H9L2 206 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 DMKNQ6E0U4 476 aaPredicted RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 HEPHL1Q6MZM0 1159 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 TMEM64Q6YI46 380 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 SLC16A11Q8NCK7 471 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 OR2L2Q8NH16 312 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 RBM14Q96PK6 669 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 OR1F2PQ96R84 312 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 FN3KQ9H479 309 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 CCDC86Q9H6F5 360 aaKnown RBP12.68□□□□□ -0.38
SYNE3-201ENST00000334258 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 AIPO00170 330 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 ITGA10O75578 1167 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PRKAR1BP31321 381 aa12.68□□□□□ -0.38
SYNE3-201ENST00000334258 PSMB10P40306 273 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms