RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ALOXE3Q9BYJ1 711 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 CD244Q9BZW8 370 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 COL6A6A6NMZ7 2263 aa9.73□□□□□ -0.85
SPTBN1-201ENST00000333896 OR2A25A4D2G3 310 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 PIM1P11309 404 aaPredicted RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CHRNB4P30926 498 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC35A2P78381 396 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 BLNKQ8WV28 456 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 UPRTQ96BW1 309 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 KATNB1Q9BVA0 655 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GAB2Q9UQC2 676 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 ACACAQ13085 2346 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 TRAV18A0A075B6X5 111 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 C4BPAP04003 597 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SPATA31C1P0DKV0 1188 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RACK1P63244 317 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 FAM213BQ8TBF2 198 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CRAMP1Q96RY5 1269 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 HERPUD2Q9BSE4 406 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 NXF2Q9GZY0 626 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 ZDHHC4Q9NPG8 344 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 KCNG2Q9UJ96 466 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 MANBAO00462 879 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GJB1P08034 283 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 ACP2P11117 423 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GABRR1P24046 479 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SGSHP51688 502 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 DTWD1Q8N5C7 304 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GATSQ8NAP1 163 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 FBXO27Q8NI29 283 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM43Q9BTV4 400 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SEMA4CQ9C0C4 833 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SIX2Q9NPC8 291 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RASD1Q9Y272 281 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 BCKDHBP21953 392 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 NKX3-2P78367 333 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 OR2T2Q6IF00 324 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GOLGA7Q7Z5G4 137 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RBMXL3Q8N7X1 1067 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 MAGEH1Q9H213 219 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CD163L1Q9NR16 1453 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SERTM2A0A1B0GWG4 89 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GPR39O43194 453 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GNSP15586 552 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 OR9K2Q8NGE7 335 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC17A6Q9P2U8 582 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CPNE7Q9UBL6 633 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 DIP2BQ9P265 1576 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 TNFP01375 233 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 STAG3L3P0CL85 134 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 OR12D1P0DN82 309 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GCH1P30793 250 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CNR2P34972 360 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GATMP50440 423 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RPS18P62269 152 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 TAF10Q12962 218 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GPR17Q13304 367 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 OR52E2Q8NGJ4 325 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 IL1F10Q8WWZ1 152 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 C20orf24Q9BUV8 137 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 THSD1Q9NS62 852 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 IL36AQ9UHA7 158 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 MAFBQ9Y5Q3 323 aaPredicted RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 GPR4P46093 362 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 CLDN8P56748 225 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC14A1Q13336 389 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 RPL10LQ96L21 214 aaKnown RBP9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 DIP2CQ9Y2E4 1556 aa9.72□□□□□ -0.85
SPTBN1-201ENST00000333896 TRDV1A0A1B0GX56 115 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 MSTNO14793 375 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 CARD18P57730 90 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 SLC38A6Q8IZM9 456 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 SFT2D1Q8WV19 159 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 RIPK3Q9Y572 518 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 POU2F2P09086 479 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 SELENBP1Q13228 472 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM88Q6PEY1 159 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PTRH1Q86Y79 214 aaKnown RBP9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 TMEM234Q8WY98 164 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 OSBPL2Q9H1P3 480 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 CRLF2Q9HC73 371 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PLAGL1Q9UM63 463 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 TRAPPC4Q9Y296 219 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PXDNQ92626 1479 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 KLK3P07288 261 aaPredicted RBP9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 AKR1A1P14550 325 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 SERPINA2P20848 420 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PTGER4P35408 488 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 SRP9P49458 86 aaKnown RBP9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PSMB3P49720 205 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 CHADLQ6NUI6 762 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 TANKQ92844 425 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 CABLES2Q9BTV7 478 aa9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.85
SPTBN1-201ENST00000333896 PDHXO00330 501 aa9.71□□□□□ -0.86
SPTBN1-201ENST00000333896 ZNF17P17021 662 aa9.71□□□□□ -0.86
SPTBN1-201ENST00000333896 OR1D2P34982 312 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms