RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PHOSPHO1Q8TCT1 267 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 RNF128Q8TEB7 428 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 FIG4Q92562 907 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SLC35B4Q969S0 331 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CHMP6Q96FZ7 201 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 RSRC1Q96IZ7 334 aaKnown RBP5.66□□□□□ -1.5
SMG1-201ENST00000330588 RNF145Q96MT1 663 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SLC35A5Q9BS91 424 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 YIPF4Q9BSR8 244 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 OR51I1Q9H343 314 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 SERHL2Q9H4I8 314 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 RMND5AQ9H871 391 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 VIPAS39Q9H9C1 493 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ACER3Q9NUN7 267 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PNPOQ9NVS9 261 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ZNF226Q9NYT6 803 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 CALML5Q9NZT1 146 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 ST6GALNAC2Q9UJ37 374 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 GPR160Q9UJ42 338 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 PCNX1Q96RV3 2341 aa5.66□□□□□ -1.5
SMG1-201ENST00000330588 COL12A1Q99715 3063 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 A0A0J9YW62 118 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 C17orf51A8MQB3 221 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 ZNF195O14628 629 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 SEC14L5O43304 696 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 UGT2B17O75795 530 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 CSTAP01040 98 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 RAF1P04049 648 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 HRGP04196 525 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PSMB1P20618 241 aaKnown RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 EFNA1P20827 205 aaPredicted RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 CRYGSP22914 178 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 UGT2B10P36537 528 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PGM1P36871 562 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 APOBEC1P41238 236 aaKnown RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 HTR3AP46098 478 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 CARD18P57730 90 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 RAC3P60763 192 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 FOXF1Q12946 379 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 FADDQ13158 208 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 GNA13Q14344 377 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PDZK1Q5T2W1 519 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PAMR1Q6UXH9 720 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 FRRS1Q6ZNA5 592 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 LRRC74BQ6ZQY2 392 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 GALNT10Q86SR1 603 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 STK32CQ86UX6 486 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 ANKRD46Q86W74 232 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 CDC20BQ86Y33 519 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 UBQLNLQ8IYU4 475 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 GCNT2Q8N0V5 402 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 ANKRD42Q8N9B4 389 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 OR5AK3PQ8NH89 298 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 FBXO30Q8TB52 745 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 ZFP90Q8TF47 636 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 MAP6Q96JE9 813 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 MARK4Q96L34 752 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 CCDC140Q96MF4 163 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 CLUHP3Q96NS8 147 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 OR52E6Q96RD3 313 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PANX1Q96RD7 426 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 PIP5K1AQ99755 562 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 GPATCH1Q9BRR8 931 aaKnown RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 HDHD5Q9BXW7 423 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 RAD21L1Q9H4I0 556 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 BCO1Q9HAY6 547 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 SERINC1Q9NRX5 453 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 MARCOQ9UEW3 520 aaPredicted RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 PROCRQ9UNN8 238 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 VDAC3Q9Y277 283 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 WDR45Q9Y484 360 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 SPIN1Q9Y657 262 aaPredicted RBP5.65□□□□□ -1.5
SMG1-201ENST00000330588 KCNE3Q9Y6H6 103 aa5.65□□□□□ -1.5
SMG1-201ENST00000330588 MED12LQ86YW9 2145 aa5.65□□□□□ -1.51
SMG1-201ENST00000330588 DSPPQ9NZW4 1301 aa5.65□□□□□ -1.51
SMG1-201ENST00000330588 PKDREJQ9NTG1 2253 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CCDC154A6NI56 674 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 AGAP5A6NIR3 686 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 ZNF724A8MTY0 619 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 C16orf97H3BN30 126 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 HMGN4O00479 90 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CASKO14936 926 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 UBDO15205 165 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 SLC22A3O75751 556 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 AQP8O94778 261 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 PMS2P2O95744 297 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 NUDT14O95848 222 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 POU2F1P14859 743 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 DNASE1P24855 282 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 IL12AP29459 219 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 AGTR1P30556 359 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CCKARP32238 428 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CHI3L1P36222 383 aaPredicted RBP5.64□□□□□ -1.51
SMG1-201ENST00000330588 ATP4BP51164 291 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CTBP2P56545 445 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 UFM1P61960 85 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 CSNK2A1P68400 391 aaPredicted RBP5.64□□□□□ -1.51
SMG1-201ENST00000330588 KCNJ10P78508 379 aa5.64□□□□□ -1.51
SMG1-201ENST00000330588 HPCAP84074 193 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms