RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KRT73Q86Y46 540 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 C10orf111Q8N326 155 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 CADM2Q8N3J6 435 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 ZC3HAV1LQ96H79 300 aaKnown RBP24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 CPPED1Q9BRF8 314 aaPredicted RBP24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 SPATA5L1Q9BVQ7 753 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 HDHD5Q9BXW7 423 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 OR10A4Q9H209 315 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 EMC3Q9P0I2 261 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 C6orf203Q9P0P8 240 aaPredicted RBP24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 ABCA4P78363 2273 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 SLC6A2P23975 617 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 ABLIM2Q6H8Q1 611 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 GALNT5Q7Z7M9 940 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 PIGXQ8TBF5 258 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 DNAJA3Q96EY1 480 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 ZNF300Q96RE9 604 aaPredicted RBP24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 PLEKHF2Q9H8W4 249 aa24.54■■□□□ 1.52
ATPAF1-201ENST00000329231 EIF1BO60739 113 aaKnown RBP24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 PRG2P13727 222 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 DNASE1P24855 282 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 PRKAR1BP31321 381 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 IST1P53990 364 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 SLC35A1P78382 337 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 SCARB2Q14108 478 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 TESK1Q15569 626 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 SERPINA11Q86U17 422 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 GABRG1Q8N1C3 465 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 CGREF1Q99674 301 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 ACTR6Q9GZN1 396 aa24.53■■□□□ 1.52
ATPAF1-201ENST00000329231 IGKV3D-15A0A087WSY6 115 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 DEFB108AA8MXU0 73 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 GCM2O75603 506 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 OR3A2P47893 321 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 C22orf34Q6ZV56 151 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 RETREG3Q86VR2 466 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 CXorf67Q86X51 503 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 STEAP2Q8NFT2 490 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 C10orf82Q8WW14 230 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 ZNF775Q96BV0 537 aaPredicted RBP24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 ANKRD27Q96NW4 1050 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 ZNF607Q96SK3 696 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 POTEKPQ9BYX7 375 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 PLEKHA6Q9Y2H5 1048 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 AKAP6Q13023 2319 aa24.52■■□□□ 1.52
ATPAF1-201ENST00000329231 ART1P52961 327 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 NFYCQ13952 458 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 P2RY6Q15077 328 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 ADRM1Q16186 407 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 PAMR1Q6UXH9 720 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 HIPK4Q8NE63 616 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 PIK3IP1Q96FE7 263 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 NAA11Q9BSU3 229 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 SAR1AQ9NR31 198 aa24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 CCM2LQ9NUG4 571 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-201ENST00000329231 ZC3H12DA2A288 527 aaKnown RBP24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 ZNF716A6NP11 495 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 GPR171O14626 319 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 SIAH2O43255 324 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 ADAP00813 363 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 IMPDH2P12268 514 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 IDUAP35475 653 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 H3F3AP84243 136 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 SFRP5Q5T4F7 317 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 DHRS4L2Q6PKH6 230 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 Q6ZT83 130 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 ZNF100Q8IYN0 542 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 ANGPT4Q9Y264 503 aa24.5■■□□□ 1.51
ATPAF1-201ENST00000329231 A0A1W2PPR1 153 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 PRORSD1PA6NEY8 169 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 A8MVM7 634 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 ZNF814B7Z6K7 855 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 FRS3O43559 492 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 SERPINB7O75635 380 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 RAF1P04049 648 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 GPIP06744 558 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 THBDP07204 575 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 FPR1P21462 350 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 IL32P24001 234 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 SLC16A1P53985 500 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 RBBP4Q09028 425 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 CYP51A1Q16850 503 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 SPNS3Q6ZMD2 512 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 CCDC103Q8IW40 242 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 C11orf65Q8NCR3 313 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 BHLHE22Q8NFJ8 381 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 KISS1RQ969F8 398 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 C3orf49Q96BT1 292 aa24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 NOSIPQ9Y314 301 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-201ENST00000329231 CNOT4O95628 575 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 SEC24CP53992 1094 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 MTPNP58546 118 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 HOXC5Q00444 222 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 ITGADQ13349 1161 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 KEAP1Q14145 624 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 PAQR6Q6TCH4 344 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 S100PBPQ96BU1 408 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 FOXC2Q99958 501 aa24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 USB1Q9BQ65 265 aaKnown RBP24.48■■□□□ 1.51
ATPAF1-201ENST00000329231 RPS6KB2Q9UBS0 482 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms