RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FOXS1O43638 330 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 E2F6O75461 281 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 GMNNO75496 209 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 KLK1P06870 262 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 SLC35G6P0C7Q6 338 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 BMP4P12644 408 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 CPN1P15169 458 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PSMB5P28074 263 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PPP2R1BP30154 601 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 GSTT1P30711 240 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TLX1P31314 330 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 NME5P56597 212 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 TEKQ02763 1124 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 DUSP8Q13202 625 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 GNA13Q14344 377 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 PATL1Q86TB9 770 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 SPATA24Q86W54 205 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ANKRD46Q86W74 232 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 OR56A1Q8NGH5 318 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 FAM110DQ8TAY7 271 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 CANT1Q8WVQ1 401 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 CCDC124Q96CT7 223 aaKnown RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 DHRS1Q96LJ7 313 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 OR1F2PQ96R84 312 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 HBEGFQ99075 208 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 LYSTQ99698 3801 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 SOX7Q9BT81 388 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 ANKRD60Q9BZ19 345 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 IL1RAPQ9NPH3 570 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 POLE3Q9NRF9 147 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 GPATCH2Q9NW75 528 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.88□□□□□ -1.47
CSTF3-201ENST00000323959 DSPPQ9NZW4 1301 aa5.88□□□□□ -1.47
CSTF3-201ENST00000323959 COL7A1Q02388 2944 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 GNG14A0A1W2PPG7 69 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 MAGEA13PA6NCF6 341 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TMEM229AB2RXF0 380 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HCRTR2O43614 444 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TMPRSS11DO60235 418 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 DEAF1O75398 565 aaPredicted RBP5.87□□□□□ -1.47
CSTF3-201ENST00000323959 NDUFA7O95182 113 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 IFNA14P01570 189 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 OPN1MWP04001 364 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 OPN1MW2P0DN77 364 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 OPN1MW3P0DN78 364 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 KDELR2P33947 212 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 MAP3K8P41279 467 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HMGA2P52926 109 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HBA1P69905 142 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 IL18R1Q13478 541 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 SF1Q15637 639 aaKnown RBP5.87□□□□□ -1.47
CSTF3-201ENST00000323959 PRSS53Q2L4Q9 553 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 RFX4Q33E94 735 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 RNF220Q5VTB9 566 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 USP51Q70EK9 711 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 ACOT4Q8N9L9 421 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 C11orf65Q8NCR3 313 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HIPK4Q8NE63 616 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 OR4A15Q8NGL6 344 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 C17orf50Q8WW18 174 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TANKQ92844 425 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 EPYCQ99645 322 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 EBPLQ9BY08 206 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 SLC35C2Q9NQQ7 365 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 PCDHGB4Q9UN71 923 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 PPIEQ9UNP9 301 aaKnown RBP5.87□□□□□ -1.47
CSTF3-201ENST00000323959 DTNAQ9Y4J8 743 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 COMMD3-BMI1R4GMX3 469 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HSPE1-MOB4S4R3N1 261 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 C4orf51C9J302 202 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 CLOCKO15516 846 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 ATP1B1P05026 303 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 HPNP05981 417 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 GIFP27352 417 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 MTPNP58546 118 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 PGS1Q32NB8 556 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TOR1AIP1Q5JTV8 583 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 GCNT6Q5T4J0 391 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 CARM1Q86X55 608 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 RNF175Q8N4F7 328 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 SMYD1Q8NB12 490 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 ICA1LQ8NDH6 482 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 OR10A6Q8NH74 314 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 FBLIM1Q8WUP2 373 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 AMDHD1Q96NU7 426 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 F2RL3Q96RI0 385 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 ZNF347Q96SE7 839 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 GPA33Q99795 319 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 USB1Q9BQ65 265 aaKnown RBP5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TMEM165Q9HC07 324 aa5.87□□□□□ -1.47
CSTF3-201ENST00000323959 TRBV11-1A0A0K0K1C0 115 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 GALR3O60755 368 aaPredicted RBP5.86□□□□□ -1.47
CSTF3-201ENST00000323959 PFDN1O60925 122 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 NSA2O95478 260 aaKnown RBP5.86□□□□□ -1.47
CSTF3-201ENST00000323959 ETS2P15036 469 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 ADRA2CP18825 462 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 PEX2P28328 305 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 RAB38P57729 211 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 CHRNB3Q05901 458 aa5.86□□□□□ -1.47
CSTF3-201ENST00000323959 CYP51A1Q16850 503 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms