RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CT45A2Q5DJT8 189 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 HEPHL1Q6MZM0 1159 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 FAM199XQ6PEV8 388 aaPredicted RBP7□□□□□ -1.29
TRIM55-202ENST00000315962 CBLN3Q6UW01 205 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 NR2C2APQ86WQ0 139 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 RDH10Q8IZV5 341 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 OR8H3Q8N146 312 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 CYB561A3Q8NBI2 242 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 OR51L1Q8NGJ5 315 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 DNASE2BQ8WZ79 361 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 MOAP1Q96BY2 351 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF524Q96C55 264 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 CTHRC1Q96CG8 243 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF764Q96H86 408 aaPredicted RBP7□□□□□ -1.29
TRIM55-202ENST00000315962 MS4A3Q96HJ5 214 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 OR6C1Q96RD1 312 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 RTN4RQ9BZR6 473 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 SAP130Q9H0E3 1048 aa7□□□□□ -1.29
TRIM55-202ENST00000315962 PPIL3Q9H2H8 161 aaKnown RBP7□□□□□ -1.29
TRIM55-202ENST00000315962 RPL36Q9Y3U8 105 aaKnown RBP7□□□□□ -1.29
TRIM55-202ENST00000315962 DSPPQ9NZW4 1301 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 TEX51A0A1B0GUA7 166 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 A0A1W2PQM1 296 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SH3D21A4FU49 640 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 CDHR4A6H8M9 788 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MASP2O00187 686 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 FABP7O15540 132 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NUDT21O43809 227 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 DUX1O43812 170 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 CTNSO60931 367 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 RAB36O95755 333 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ADAP00813 363 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MRPL3P09001 348 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ARSBP15848 533 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MAKP20794 623 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ST3GAL3Q11203 375 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 GRM7Q14831 915 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 PHF19Q5T6S3 580 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 OTPQ5XKR4 325 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SIGIRRQ6IA17 410 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 XKRXQ6PP77 449 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MED25Q71SY5 747 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 KLBQ86Z14 1044 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 PLXDC1Q8IUK5 500 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 IZUMO1Q8IYV9 350 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF619Q8N2I2 560 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 OR8J1Q8NGP2 316 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NEIL3Q8TAT5 605 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 PTPMT1Q8WUK0 201 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 GIMAP1Q8WWP7 306 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SAMD8Q96LT4 415 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NDC1Q9BTX1 674 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF350Q9GZX5 532 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 KLHL1Q9NR64 748 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NKIRAS2Q9NYR9 191 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 FBXL4Q9UKA2 621 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ACAD8Q9UKU7 415 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 C4orf47A7E2U8 309 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 LAMTOR5O43504 91 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 BRINP1O60477 761 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NSA2O95478 260 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NGFRP08138 427 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 TFPIP10646 304 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 CLUP10909 449 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NID1P14543 1247 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ZNF250P15622 560 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 TBXA2RP21731 343 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 GZMKP49863 264 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 WNT4P56705 351 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 EEF1A1P68104 462 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 CCL7P80098 99 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MLLT11Q13015 90 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ZNHIT3Q15649 155 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ARHGAP40Q5TG30 622 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 PXDC1Q5TGL8 231 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SAMD14Q8IZD0 417 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 PROKR2Q8NFJ6 384 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 OR13C2Q8NGS9 318 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SETD6Q8TBK2 473 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 POP5Q969H6 163 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 C8orf44Q96CB5 159 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 TWSG1Q9GZX9 223 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NXF5Q9H1B4 397 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 DUSP15Q9H1R2 295 aaPredicted RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 SLA2Q9H6Q3 261 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 NPAP1Q9NZP6 1156 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 EXTL2Q9UBQ6 330 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MGAT4BQ9UQ53 548 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 MRPS33Q9Y291 106 aaKnown RBP6.99□□□□□ -1.29
TRIM55-202ENST00000315962 ARID1AO14497 2285 aa6.99□□□□□ -1.29
TRIM55-202ENST00000315962 IQCMA0A1B0GVH7 501 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 INMT-MINDY4F8WBC2 141 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 SOCS6O14544 535 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 IMPA2O14732 288 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 SLC30A4O14863 429 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 ARHGEF9O43307 516 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 EEF1E1O43324 174 aaKnown RBP6.98□□□□□ -1.29
TRIM55-202ENST00000315962 HRGP04196 525 aa6.98□□□□□ -1.29
TRIM55-202ENST00000315962 FCER2P06734 321 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms