RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 SGPP2Q8IWX5 399 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ST6GALNAC5Q9BVH7 336 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 VSX1Q9NZR4 365 aaPredicted RBP14.83□□□□□ -0.04
USP42-201ENST00000306177 BOKQ9UMX3 212 aaPredicted RBP14.83□□□□□ -0.04
USP42-201ENST00000306177 FAM230AA0A1W2PPH8 454 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SUSD5O60279 629 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 TFP02787 698 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 GPX2P18283 190 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 TACR3P29371 465 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 PCBD1P61457 104 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 PSPHP78330 225 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ZNF616Q08AN1 781 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ILKQ13418 452 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 MEF2DQ14814 521 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SHHQ15465 462 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 METRNLQ641Q3 311 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 OR7E24Q6IFN5 339 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 GPR78Q96P69 363 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 KIR3DX1Q9H7L2 352 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 ZNF281Q9Y2X9 895 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SIT1Q9Y3P8 196 aa14.83□□□□□ -0.04
USP42-201ENST00000306177 SLC5A10A0PJK1 596 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 PRKRAO75569 313 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 DCDP81605 110 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 MANEAQ5SRI9 462 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 PARM1Q6UWI2 310 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 FAM160A2Q8N612 972 aaPredicted RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 PPP1R35Q8TAP8 253 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 TBC1D15Q8TC07 691 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 HRASLS5Q96KN8 279 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 KATNB1Q9BVA0 655 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 HCAR1Q9BXC0 346 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ULBP2Q9BZM5 246 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 RHBDD3Q9Y3P4 386 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 NKX2-5P52952 324 aaPredicted RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 ADARB1P78563 741 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 ABHD5Q8WTS1 349 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ELSPBP1Q96BH3 223 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 LCORQ96JN0 433 aaPredicted RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 FOXN4Q96NZ1 517 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 LYSMD1Q96S90 227 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 PRRT1Q99946 306 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 SLC6A17Q9H1V8 727 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 PDFQ9HBH1 243 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 CD300AQ9UGN4 299 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 MOKQ9UQ07 419 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 MMACHCQ9Y4U1 282 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 B3GALT1Q9Y5Z6 326 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 TLCD2A6NGC4 264 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ARPC1BO15143 372 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 HCRTR1O43613 425 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 MTHFD2P13995 350 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 NR4A2P43354 598 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 C3orf38Q5JPI3 329 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 GARNL3Q5VVW2 1013 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 TBPL2Q6SJ96 375 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ECM29Q5VYK3 1845 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 KRBA1A5PL33 1030 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ZNF705EA8MWA4 302 aaPredicted RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 NUDT21O43809 227 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 DCNP07585 359 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 ELAVL4P26378 380 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 GABRA5P31644 462 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 TNFSF8P32971 234 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 POLR2IP36954 125 aaKnown RBP14.82□□□□□ -0.04
USP42-201ENST00000306177 ADIPOR2Q86V24 386 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 DEDD2Q8WXF8 326 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 ZNF285Q96NJ3 590 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 SPIN2AQ99865 258 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 SPIN2BQ9BPZ2 258 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 NT5DC2Q9H857 520 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 OLAHQ9NV23 265 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 PSORS1C1Q9UIG5 152 aa14.82□□□□□ -0.04
USP42-201ENST00000306177 IGHEP01854 428 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 CR2P20023 1033 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 PTCRAQ6ISU1 281 aaPredicted RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 OR13H1Q8NG92 308 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SLC2A12Q8TD20 617 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 EDAQ92838 391 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SLC41A2Q96JW4 573 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SLC46A1Q96NT5 459 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 ATG4BQ9Y4P1 393 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 FAM155AB1AL88 458 aaPredicted RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 TNFRSF10CO14798 259 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SIGLEC6O43699 453 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 WDPCPO95876 746 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 HTR2BP41595 481 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 SNRPD2P62316 118 aaKnown RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 RAB9BQ9NP90 201 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 DOCK2Q92608 1830 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 DCAF12Q5T6F0 453 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 ZNF767PQ75MW2 155 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 PARP16Q8N5Y8 322 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 DUSP19Q8WTR2 217 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 TNFRSF13CQ96RJ3 184 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 NXF5Q9H1B4 397 aaKnown RBP14.81□□□□□ -0.04
USP42-201ENST00000306177 BCORQ6W2J9 1755 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 CTNSO60931 367 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 OR8U9P0C7N5 309 aa14.81□□□□□ -0.04
USP42-201ENST00000306177 CDK4P11802 303 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms