RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 VN1R3Q9BXE9 311 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MED1Q15648 1581 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF732B4DXR9 585 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 FOXE1O00358 373 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 CNIH1O95406 144 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 HNRNPA1P09651 372 aaKnown RBP eCLIP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 FOLR1P15328 257 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PROZP22891 400 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 CAMK2BQ13554 666 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 OR8B8Q15620 311 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ACTBL2Q562R1 376 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 HACD4Q5VWC8 232 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 NAGSQ8N159 534 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 LRRC18Q8N456 261 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 NETO1Q8TDF5 533 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ZBED3Q96IU2 234 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MRGPRX2Q96LB1 330 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 IL26Q9NPH9 171 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF331Q9NQX6 463 aaPredicted RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 BTBD17A6NE02 478 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PLSCR1O15162 318 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 HEXAP06865 529 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ACSM1Q08AH1 577 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 CEACAM7Q14002 265 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PROX2Q3B8N5 592 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MOB1BQ7L9L4 216 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 GLB1L2Q8IW92 636 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 OR52B6Q8NGF0 335 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RASD1Q9Y272 281 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PIAS3Q9Y6X2 628 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 CAMTA1Q9Y6Y1 1673 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 A0A087WZY1 265 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 A6NIN4 97 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 NKX6-3A6NJ46 265 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 CD46P15529 392 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 NME2P22392 152 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RAB13P51153 203 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 GPR18Q14330 331 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 TIGD3Q6B0B8 471 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 IGDCC3Q8IVU1 814 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 RBM12BQ8IXT5 1001 aaKnown RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SLC35G3Q8N808 338 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 SCCPDHQ8NBX0 429 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MYADMQ96S97 322 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 TUBB1Q9H4B7 451 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 DDX31Q9H8H2 851 aaKnown RBP9.73□□□□□ -0.85
CLIP1-201ENST00000302528 ISYNA1Q9NPH2 558 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 QPCTLQ9NXS2 382 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 MTCH1Q9NZJ7 389 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 PRELID3BQ9Y3B1 194 aa9.73□□□□□ -0.85
CLIP1-201ENST00000302528 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 A0A1W2PPH5 198 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ANTXRLA6NF34 631 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SGK494L7N484 410 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SLC43A1O75387 559 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 FABP1P07148 127 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 FCGR2AP12318 317 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 LAP3P28838 519 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 CDKN2DP55273 166 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SLC35A2P78381 396 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 IRF4Q15306 451 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SOHLH1Q5JUK2 328 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 PAGE3Q5JUK9 113 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 PLAG1Q6DJT9 500 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 VASNQ6EMK4 673 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 APOOLQ6UXV4 268 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ESPNLQ6ZVH7 1005 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 NIPSNAP3BQ9BS92 247 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 CENPOQ9BU64 300 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 Q9Y3F1 56 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 FRS3O43559 492 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 GLB1P16278 677 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 IMPA1P29218 277 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 HOXA11P31270 313 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 PSMB3P49720 205 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 UBE2G1P62253 170 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 HTRA4P83105 476 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF33BQ06732 778 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ARHGAP11BQ3KRB8 267 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 OR7E24Q6IFN5 339 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 DUSP19Q8WTR2 217 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SMAP2Q8WU79 429 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 GIMAP1Q8WWP7 306 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 APH1AQ96BI3 265 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 SLC6A20Q9NP91 592 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 HEYLQ9NQ87 328 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 WASH6PQ9NQA3 447 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 BOKQ9UMX3 212 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 EXO1Q9UQ84 846 aaKnown RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 GAB2Q9UQC2 676 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 A0A0A6YYC8 382 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 A0A1W2PQ09 198 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 I3L1I5 382 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 XRCC3O43542 346 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 PENKP01210 267 aaPredicted RBP9.72□□□□□ -0.85
CLIP1-201ENST00000302528 ZNF728P0DKX0 622 aa9.72□□□□□ -0.85
CLIP1-201ENST00000302528 OPRL1P41146 370 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms