RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 B3GLCTQ6Y288 498 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 ATCAYQ86WG3 371 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 GID4Q8IVV7 300 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 SLC37A3Q8NCC5 494 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 OR2Y1Q8NGV0 311 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 TBC1D15Q8TC07 691 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 KTI12Q96EK9 354 aaPredicted RBP20.29■□□□□ 0.84
SMAD1-201ENST00000302085 MOGAT1Q96PD6 335 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 ERMAPQ96PL5 475 aaPredicted RBP20.29■□□□□ 0.84
SMAD1-201ENST00000302085 STRADBQ9C0K7 418 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 SLC24A3Q9HC58 644 aa20.29■□□□□ 0.84
SMAD1-201ENST00000302085 IGHV1-45A0A0A0MS14 117 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 ZC3H12DA2A288 527 aaKnown RBP20.28■□□□□ 0.84
SMAD1-201ENST00000302085 RIIAD1A6NNX1 92 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 PRR23D1E9PI22 279 aaPredicted RBP20.28■□□□□ 0.84
SMAD1-201ENST00000302085 MYL12BO14950 172 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 SCG5P05408 212 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 PRR23D2P0DMB1 279 aaPredicted RBP20.28■□□□□ 0.84
SMAD1-201ENST00000302085 GP1BBP13224 206 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 RPS4XP62701 263 aaKnown RBP20.28■□□□□ 0.84
SMAD1-201ENST00000302085 QPRTQ15274 297 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 NUP54Q7Z3B4 507 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 TMCO6Q96DC7 493 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 IMMP1LQ96LU5 166 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 DEFB126Q9BYW3 111 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 ZNF700Q9H0M5 742 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 OR51E2Q9H255 320 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 EXOSC1Q9Y3B2 195 aaKnown RBP20.28■□□□□ 0.84
SMAD1-201ENST00000302085 PCDHGA3Q9Y5H0 932 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 IER3IP1Q9Y5U9 82 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 EXPH5Q8NEV8 1989 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 OR2J2O76002 312 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 STK17BO94768 372 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 LIMS3P0CW19 117 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 LIMS4P0CW20 117 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 CDK4P11802 303 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 MYL12AP19105 171 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 NOS3P29474 1203 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 E2F1Q01094 437 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 CRMP1Q14194 572 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 ISXQ2M1V0 245 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 COL28A1Q2UY09 1125 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 BTBD16Q32M84 506 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 DPY19L2P2Q6ZN68 376 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 RAB11FIP2Q7L804 512 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 MISPQ8IVT2 679 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 C10orf53Q8N6V4 93 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 MOSPD2Q8NHP6 518 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 RNF138Q8WVD3 245 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 EDEM2Q9BV94 578 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 MMP25Q9NPA2 562 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 HS3ST3B1Q9Y662 390 aa20.28■□□□□ 0.84
SMAD1-201ENST00000302085 CCRL2O00421 344 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CDC40O60508 579 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMAD1-201ENST00000302085 COX6A1P12074 109 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CXCR1P25024 350 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 SOX3P41225 446 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 LIMK1P53667 647 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 RAB15P59190 212 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CDCP2Q5VXM1 449 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 OR5M10Q6IEU7 315 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 ARHGAP11AQ6P4F7 1023 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CYB561A3Q8NBI2 242 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 SUMF1Q8NBK3 374 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 TTC9Q92623 222 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 KISS1RQ969F8 398 aaPredicted RBP20.27■□□□□ 0.84
SMAD1-201ENST00000302085 TAAR8Q969N4 342 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 ZNF649Q9BS31 505 aa20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CHCHD3Q9NX63 227 aaKnown RBP20.27■□□□□ 0.84
SMAD1-201ENST00000302085 CCDC182A6NF36 153 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 B4DXG7 233 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 J3QRE1 110 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 M0R3G1 203 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 CELA2AP08217 269 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 SOWAHCQ53LP3 525 aaPredicted RBP20.26■□□□□ 0.83
SMAD1-201ENST00000302085 OR2G6Q5TZ20 316 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 POMZP3Q6PJE2 187 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 LHFPL3Q86UP9 236 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 OR52E2Q8NGJ4 325 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 DYNC2LI1Q8TCX1 351 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 RACGAP1Q9H0H5 632 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 TMEM9BQ9NQ34 198 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 NANSQ9NR45 359 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 ADAM18Q9Y3Q7 739 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 MPDZO75970 2070 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 TMEM129A0AVI4 362 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 ASAH2BP0C7U1 165 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 HIST1H1CP16403 213 aaKnown RBP20.26■□□□□ 0.83
SMAD1-201ENST00000302085 ZNF3P17036 446 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 SLC2A5P22732 501 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 RPL4P36578 427 aaKnown RBP20.26■□□□□ 0.83
SMAD1-201ENST00000302085 CD79BP40259 229 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 AQP2P41181 271 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 CLK1P49759 484 aaKnown RBP20.26■□□□□ 0.83
SMAD1-201ENST00000302085 SPEM2Q0P670 501 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 DYNC1I2Q13409 638 aaKnown RBP20.26■□□□□ 0.83
SMAD1-201ENST00000302085 BICRALQ6AI39 1079 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 SIRT6Q8N6T7 355 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 OR4K13Q8NH42 304 aa20.26■□□□□ 0.83
SMAD1-201ENST00000302085 TAAR9Q96RI9 348 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms