RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 F8A1P23610 371 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 AP2S1P53680 142 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 FHL1Q13642 323 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 CDONQ4KMG0 1287 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ACSM3Q53FZ2 586 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 TAF8Q7Z7C8 310 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 GPR135Q8IZ08 494 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 DNAJC5GQ8N7S2 189 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 AVL9Q8NBF6 648 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 FAM98AQ8NCA5 519 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 AHCYL2Q96HN2 611 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF559Q9BR84 538 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 CYSLTR2Q9NS75 346 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 DNAJB12Q9NXW2 375 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 CLEC1BQ9P126 229 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ADAM30Q9UKF2 790 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SLCO1B1Q9Y6L6 691 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 PIAS3Q9Y6X2 628 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SEC16AO15027 2179 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 EEF1E1O43324 174 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 PLPP2O43688 288 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 CHP2O43745 196 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 NKX2-2O95096 273 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 TFP02787 698 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 GAAP10253 952 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 PEPDP12955 493 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 HIST1H1CP16403 213 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 MAB21L1Q13394 359 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 GPR176Q14439 515 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 SF3A2Q15428 464 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF613Q6PF04 617 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 KIRREL2Q6UWL6 708 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 RNF44Q7L0R7 432 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 KRT74Q7RTS7 529 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 METTL27Q8N6F8 245 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ZNRF4Q8WWF5 429 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ASB12Q8WXK4 309 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 PGLYRP3Q96LB9 341 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 THAP7Q9BT49 309 aaPredicted RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 ZMAT5Q9UDW3 170 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 TMEM5Q9Y2B1 443 aa11.87□□□□□ -0.51
HIF3A-204ENST00000300862 MRPS7Q9Y2R9 242 aaKnown RBP11.87□□□□□ -0.51
HIF3A-204ENST00000300862 A0A0G2JK05 382 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 B8ZZF3 427 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 TNFRSF10CO14798 259 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 FMO6PO60774 539 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 SLC43A1O75387 559 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 HK1P19367 917 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 S1PR1P21453 382 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 AKT2P31751 481 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 TALDO1P37837 337 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 MTFR2Q6P444 385 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 RTL4Q6ZR62 310 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 ESPNLQ6ZVH7 1005 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF655Q8N720 491 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-204ENST00000300862 BMPERQ8N8U9 685 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 TRMT10AQ8TBZ6 339 aaKnown RBP11.86□□□□□ -0.51
HIF3A-204ENST00000300862 ORAI1Q96D31 301 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 CDCA3Q99618 268 aaPredicted RBP11.86□□□□□ -0.51
HIF3A-204ENST00000300862 TWSG1Q9GZX9 223 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 FOLH1BQ9HBA9 442 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 B3GNT2Q9NY97 397 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 SCML1Q9UN30 329 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 IER3IP1Q9Y5U9 82 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 CACNA1CQ13936 2221 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 MCIDASD6RGH6 385 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 INMT-MINDY4F8WBC2 141 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 PSMD9O00233 223 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 PRKACBP22694 351 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 CFL1P23528 166 aaKnown RBP11.86□□□□□ -0.51
HIF3A-204ENST00000300862 PGDP52209 483 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 UBE2IP63279 158 aaKnown RBP11.86□□□□□ -0.51
HIF3A-204ENST00000300862 BTG2P78543 158 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 RPL13AP3Q6NVV1 102 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 ZCCHC12Q6PEW1 402 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 IDO2Q6ZQW0 420 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 RCBTB1Q8NDN9 531 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 ACOT12Q8WYK0 555 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 LRIT1Q9P2V4 623 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
HIF3A-204ENST00000300862 C4orf47A7E2U8 309 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 FAM171A2A8MVW0 826 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ORC5O43913 435 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 TSC22D2O75157 780 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 TNFP01375 233 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SLC35E2P0CK97 266 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 SNRPBP14678 240 aaKnown RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GABRG2P18507 467 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GALP22466 123 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 RAB38P57729 211 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ZNF267Q14586 743 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ZBTB37Q5TC79 503 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 LRRC28Q86X40 367 aaPredicted RBP11.85□□□□□ -0.51
HIF3A-204ENST00000300862 GATSQ8NAP1 163 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 OR4C3Q8NH37 302 aa11.85□□□□□ -0.51
HIF3A-204ENST00000300862 ZPLD1Q8TCW7 415 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms