RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
COL6A2-201ENST00000300527 FBXO34Q9NWN3 711 aa13.55□□□□□ -0.24
COL6A2-201ENST00000300527 SLC39A1Q9NY26 324 aa13.55□□□□□ -0.24
COL6A2-201ENST00000300527 ABHD14A-ACY1A0A1B0GW23 586 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF860A6NHJ4 632 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 AIPO00170 330 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 RASGRP1O95267 797 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 MAS1P04201 325 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 H2BFSP57053 126 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 STPG1Q5TH74 334 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 RANBP3LQ86VV4 465 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 IFNL1Q8IU54 200 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OR6V1Q8N148 313 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 CLDND1Q9NY35 253 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 AKAP7Q9P0M2 348 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 KCNK6Q9Y257 313 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 LRIT2A6NDA9 550 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 F5H5P2 479 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 HOXA2O43364 376 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 SOD2P04179 222 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 GABRA1P14867 456 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OR1Q1Q15612 314 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 SHEQ5VZ18 495 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 MTSS1LQ765P7 747 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OVCH2Q7RTZ1 564 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 CLRN3Q8NCR9 226 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 IRF7Q92985 503 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 AICDAQ9GZX7 198 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 ING1Q9UK53 422 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 ZNF346Q9UL40 294 aaKnown RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 PLCL2Q9UPR0 1127 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 H7C2Y5 167 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 RCBTB2O95199 551 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 SERPINA3P01011 423 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 VSIG10L2P0DP72 767 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 RAB3AP20336 220 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 HIST1H1TP22492 207 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 BCL6P41182 706 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 CBFBQ13951 182 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OTPQ5XKR4 325 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 DMKNQ6E0U4 476 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 NDUFAF7Q7L592 441 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 TMPRSS12Q86WS5 348 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 TMEM185AQ8NFB2 350 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 DNAJA3Q96EY1 480 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 PTCHD1Q96NR3 888 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 C12orf57Q99622 126 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 OR52A5Q9H2C5 316 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 NPDC1Q9NQX5 325 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-201ENST00000300527 GMEB2Q9UKD1 530 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 GTF2A1LQ9UNN4 478 aa13.54□□□□□ -0.24
COL6A2-201ENST00000300527 A0A0A6YYD5 115 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 OR52A4PA6NMU1 304 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 FAM25EA8MYX2 175 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 SYT5O00445 386 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 SELENOFO60613 162 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 LILRB5O75023 590 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 NT5EP21589 574 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 P2RX1P51575 399 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 GMFBP60983 142 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 SIRPAP78324 504 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 GUCA2AQ02747 115 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 TRAM1Q15629 374 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 TMEFF1Q8IYR6 380 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 OR2L2Q8NH16 312 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 MRPS24Q96EL2 167 aaKnown RBP13.53□□□□□ -0.24
COL6A2-201ENST00000300527 ANKRD19PQ9H560 264 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 NPTNQ9Y639 398 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-201ENST00000300527 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 TRAPPC13A5PLN9 417 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 A8MXK9 166 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 WASH3PC4AMC7 463 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 BHLHE40O14503 412 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 F3P13726 295 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 SRMP19623 302 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 DLX5P56178 289 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 REEP5Q00765 189 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 MRPL2Q5T653 305 aaKnown RBP13.53□□□□□ -0.24
COL6A2-201ENST00000300527 PXKQ7Z7A4 578 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 ZFP82Q8N141 532 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 OR7G2Q8NG99 324 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 OR4D10Q8NGI6 311 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 C2CD4CQ8TF44 421 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 HSPA12BQ96MM6 686 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 NRIP3Q9NQ35 241 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 MED31Q9Y3C7 131 aa13.53□□□□□ -0.24
COL6A2-201ENST00000300527 TRBV23OR9-2A0A075B6M9 112 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 J3QRE1 110 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 ECDO95905 644 aaPredicted RBP13.52□□□□□ -0.24
COL6A2-201ENST00000300527 HIST1H2ABP04908 130 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 GALP22466 123 aa13.52□□□□□ -0.24
COL6A2-201ENST00000300527 AK4P27144 223 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms