RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 HOXD9P28356 352 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 WBP2NLQ6ICG8 309 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DUSP19Q8WTR2 217 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 C22orf15Q8WYQ4 148 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ULBP2Q9BZM5 246 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SLA2Q9H6Q3 261 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RANGRFQ9HD47 186 aaPredicted RBP12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
CHRFAM7A-201ENST00000299847 A0A0B4J2A0 478 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MEIOCA2RUB1 952 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 CSNK1EP49674 416 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SHPKQ9UHJ6 478 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RAB31Q13636 194 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ARHGAP19Q14CB8 494 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DMBX1Q8NFW5 382 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ST7LQ8TDW4 575 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RPL3LQ92901 407 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TAAR8Q969N4 342 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GIMAP5Q96F15 307 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 H0Y8G0 127 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DHRS4L1P0CG22 281 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 MYOGP15173 224 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RPL23AP62750 156 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 COX20Q5RI15 118 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LINC00696Q6ZRV3 163 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ZNF355PQ9NSJ1 428 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 LTBP3Q9NS15 1303 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TXNL1O43396 289 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 ARHGEF15O94989 841 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TNFSF4P23510 183 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TNFSF8P32971 234 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PRLHRP49683 370 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 RAB40BQ12829 278 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 BORAQ6PGQ7 559 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 HTR3DQ70Z44 454 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 TFAP2CQ92754 450 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 GTF2H4Q92759 462 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DVL3Q92997 716 aaPredicted RBP12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 NTMT1Q9BV86 223 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 DHCR7Q9UBM7 475 aaKnown RBP12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 PLEKHM1Q9Y4G2 1056 aa12.65□□□□□ -0.38
CHRFAM7A-201ENST00000299847 SCRG1O75711 98 aa12.65□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IGHG1P01857 330 aa12.65□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ITGAMP11215 1152 aa12.65□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BCL7BQ9BQE9 202 aa12.65□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RGPD2P0DJD1 1756 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ANKRD34BA5PLL1 514 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HSBP1L1C9JCN9 74 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CTDSP2O14595 271 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MT-CO2P00403 227 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DAPP51397 102 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TAS2R31P59538 309 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GPR19Q15760 415 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NUDT8Q8WV74 236 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C12orf49Q9H741 205 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NPC1O15118 1278 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FXNQ16595 210 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GOLM1Q8NBJ4 401 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SCML1Q9UN30 329 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ENTPD2Q9Y5L3 495 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 A0A1W2PPV4 95 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ATXN1LP0C7T5 689 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IKZF1Q13422 519 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 VEZF1Q14119 521 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BPIFB2Q8N4F0 458 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZC3HAV1LQ96H79 300 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MEGF11A6BM72 1044 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 I6L893 689 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TIMM8AO60220 97 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CXCL12P48061 93 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HOXA1P49639 335 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RPP30P78346 268 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LAX1Q8IWV1 398 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CBARPQ8N350 705 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TNFRSF13CQ96RJ3 184 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KATNB1Q9BVA0 655 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC6A14Q9UN76 642 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TPT1P13693 172 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RNF4P78317 190 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 AADACL3Q5VUY0 350 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TRNP1Q6NT89 227 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CBLL1Q75N03 491 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PPP1R3BQ86XI6 285 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LILRA3Q8N6C8 439 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DRAXINQ8NBI3 349 aaPredicted RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMEM255BQ8WV15 326 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PSMF1Q92530 271 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CMSS1Q9BQ75 279 aaKnown RBP12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC6A20Q9NP91 592 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KCNJ16Q9NPI9 418 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OSGIN1Q9UJX0 560 aa12.64□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FBXL2Q9UKC9 423 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms