RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 PSMD9O00233 223 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 KHNYNO15037 678 aaKnown RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 PRICKLE3O43900 615 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 STX11O75558 287 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 DHFRP00374 187 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 BMP8BP34820 402 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 TNFRSF17Q02223 184 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 CRMP1Q14194 572 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 GXYLT1Q4G148 440 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 EOGTQ5NDL2 527 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 FIGLAQ6QHK4 219 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ESPNLQ6ZVH7 1005 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 BMP8AQ7Z5Y6 402 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ATOH1Q92858 354 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ZMYND19Q96E35 227 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF764Q96H86 408 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM43Q9BTV4 400 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 TRIM36Q9NQ86 728 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 OR2W5A6NFC9 320 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 HCN1O60741 890 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 CPMP14384 443 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 FOXK2Q01167 660 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 TP53I3Q53FA7 332 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF425Q6IV72 752 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 PARM1Q6UWI2 310 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 RTL10Q7L3V2 364 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ZAR1Q86SH2 424 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 OAFQ86UD1 273 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 C17orf47Q8NEP4 570 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 FGF14Q92915 247 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 PTP4A1Q93096 173 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 RERGQ96A58 199 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 WDR89Q96FK6 387 aaPredicted RBP12.43□□□□□ -0.42
CTDP1-202ENST00000299543 SORCS2Q96PQ0 1159 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 NDC1Q9BTX1 674 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 PLCL2Q9UPR0 1127 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 ERVK-19Q9WJR5 959 aa12.43□□□□□ -0.42
CTDP1-202ENST00000299543 FGF17O60258 216 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 PRKNO60260 465 aaPredicted RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 GMDSO60547 372 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 EIF4EP06730 217 aaKnown RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 STOMP27105 288 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF136P52737 540 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 TSPAN5P62079 268 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 RPS15AP62244 130 aaKnown RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 TFF2Q03403 129 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 VASNQ6EMK4 673 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 PAQR7Q86WK9 346 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 IZUMO1Q8IYV9 350 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 FAM98AQ8NCA5 519 aaKnown RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF485Q8NCK3 441 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 OR4K13Q8NH42 304 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 ORAI1Q96D31 301 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 C10orf90Q96M02 699 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 TNFRSF13CQ96RJ3 184 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 TEAD3Q99594 435 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 OR6C2Q9NZP2 312 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 DAPP1Q9UN19 280 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 MED31Q9Y3C7 131 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 RIIAD1A6NNX1 92 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 LRRN3E7EW58 273 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 H3BSH0 61 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 OR10H2O60403 315 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 SIX6O95475 246 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 CD3GP09693 182 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 ADPRHP54922 357 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 SCRN3Q0VDG4 424 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 NIPAL3Q6P499 406 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 GPALPP1Q8IXQ4 340 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 C7orf61Q8IZ16 206 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 TMEM52Q8NDY8 209 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 OR52N1Q8NH53 320 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 CNOT9Q92600 299 aaKnown RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 DNAJA3Q96EY1 480 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 ZNF578Q96N58 590 aaPredicted RBP12.42□□□□□ -0.42
CTDP1-202ENST00000299543 DMRTA2Q96SC8 542 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 REG4Q9BYZ8 158 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 SHARPINQ9H0F6 387 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 LRRN3Q9H3W5 708 aa12.42□□□□□ -0.42
CTDP1-202ENST00000299543 hCG_1807616A0A1W2PRN6 198 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GPR89AB7ZAQ6 455 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GPR89BP0CG08 455 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 ANXA3P12429 323 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FOSL1P15407 271 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 TYRP1P17643 537 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 F8A1P23610 371 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FNTBP49356 437 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 HSF2Q03933 536 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SLC25A35Q3KQZ1 300 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 CLLU1Q5K131 121 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 CD200R1LQ6Q8B3 271 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 GPR135Q8IZ08 494 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SLC44A3Q8N4M1 653 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 FAM181AQ8N9Y4 354 aa12.41□□□□□ -0.42
CTDP1-202ENST00000299543 SDR9C7Q8NEX9 313 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms