RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CYR61O00622 381 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 EPXP11678 715 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 SNX33Q8WV41 574 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 BMFQ96LC9 184 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 ZFYVE21Q9BQ24 234 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 TCEAL2Q9H3H9 227 aaPredicted RBP22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 DUSP22Q9NRW4 184 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 TRBV2A0A0J9YWF9 115 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 LINC01565O15544 149 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 CBX7O95931 251 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 RPL4P36578 427 aaKnown RBP22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 NRG3P56975 720 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 ENPP2Q13822 863 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 ST3GAL2Q16842 350 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 SCMH1Q96GD3 660 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 FKRPQ9H9S5 495 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 GDE1Q9NZC3 331 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 DOCK8Q8NF50 2099 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 TYRP1P17643 537 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 EDNRAP25101 427 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 CLPPQ16740 277 aaPredicted RBP22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 STPG1Q5TH74 334 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 RTL4Q6ZR62 310 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 GATSQ8NAP1 163 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 CAMKVQ8NCB2 501 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 OR9A4Q8NGU2 314 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 RELTQ969Z4 430 aa22.44■■□□□ 1.18
SPTSSA-201ENST00000298130 OR10H2O60403 315 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 ATP1B1P05026 303 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 CELA2BP08218 269 aaPredicted RBP22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 BTG1P62324 171 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 KIRREL2Q6UWL6 708 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 CREB3L2Q70SY1 520 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 ELMOD2Q8IZ81 293 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 SAMD14Q8IZD0 417 aaPredicted RBP22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 OR8H3Q8N146 312 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 GIMAP1Q8WWP7 306 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 KCTD12Q96CX2 325 aaKnown RBP22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 C1QTNF7Q9BXJ2 289 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 SFXN1Q9H9B4 322 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 POT1Q9NUX5 634 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 ARID1BQ8NFD5 2236 aaPredicted RBP22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 C5orf67F2Z3F1 127 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 FLRT2O43155 660 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 ACAA2P42765 397 aaKnown RBP22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 PSG6Q00889 435 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 TMEM255AQ5JRV8 349 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 FAAP20Q6NZ36 180 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 RASD2Q96D21 266 aa22.43■■□□□ 1.18
SPTSSA-201ENST00000298130 NOS1APO75052 506 aaPredicted RBP22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 HPXP02790 462 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 HOXB2P14652 356 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 PGDP52209 483 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 RPS11P62280 158 aaKnown RBP eCLIP22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 ITPRIPL2Q3MIP1 535 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 OTPQ5XKR4 325 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 TPRA1Q86W33 373 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 SLC22A18Q96BI1 424 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 TSSK2Q96PF2 358 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 ING4Q9UNL4 249 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 LAMA1P25391 3075 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 A0A1W2PQF6 199 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 GMDSO60547 372 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 UBE2Q1Q7Z7E8 422 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 ANKRD9Q96BM1 317 aaPredicted RBP22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 SPACA7Q96KW9 195 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 GAS2L1Q99501 681 aaPredicted RBP22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 HRASLS2Q9NWW9 162 aa22.42■■□□□ 1.18
SPTSSA-201ENST00000298130 URADA6NGE7 173 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 KIR2DS3Q14952 304 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 KIAA1324Q6UXG2 1013 aaKnown RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 LINGO2Q7L985 606 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 CA13Q8N1Q1 262 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 SCARF2Q96GP6 870 aaPredicted RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 FAM60AQ9NP50 221 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 NOX4Q9NPH5 578 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 DNAJB12Q9NXW2 375 aaKnown RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 STMN3Q9NZ72 180 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 TRABD2BA6NFA1 517 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 SSNA1O43805 119 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 RPP14O95059 124 aaKnown RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 KLF8O95600 359 aaPredicted RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 SLC6A6P31641 620 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 ERVK-25P63136 954 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 SIRPAP78324 504 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 SNTB2Q13425 540 aaKnown RBP22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 CDK5R1Q15078 307 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 CMTM4Q8IZR5 234 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 CSNK1A1LQ8N752 337 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 INPP5EQ9NRR6 644 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 HCN3Q9P1Z3 774 aa22.41■■□□□ 1.18
SPTSSA-201ENST00000298130 GMFGO60234 142 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 SLC35F2Q8IXU6 374 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 SIPA1Q96FS4 1042 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 WDR92Q96MX6 357 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 C2orf42Q9NWW7 574 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 PRR32B1ATL7 298 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 KCNJ13O60928 360 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 ENPP1P22413 925 aa22.4■■□□□ 1.18
SPTSSA-201ENST00000298130 NTSR1P30989 418 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms