RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 EIF4E2O60573 245 aaKnown RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 PPM1BO75688 479 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 RAC1P63000 192 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 EFR3AQ14156 821 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 C21orf62-AS1Q17RA5 79 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 TUBA3EQ6PEY2 450 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 THSD4Q6ZMP0 1018 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 CADM3Q8N126 398 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-202ENST00000297979 IFT27Q9BW83 186 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 ENKD1Q9H0I2 346 aa13.03□□□□□ -0.32
C9orf3-202ENST00000297979 IRGMA1A4Y4 181 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 NOTOA8MTQ0 251 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 M0R082 166 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 SNPHO15079 494 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 FADS1O60427 444 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 SLC2A10O95528 541 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 TGFBR2P37173 567 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 BLVRAP53004 296 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 NFATC3Q12968 1075 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 CTF1Q16619 201 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 KLHL22Q53GT1 634 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 AADACL4Q5VUY2 407 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 RFPL4BQ6ZWI9 263 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 OR5L2Q8NGL0 311 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF563Q8TA94 476 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 RFKQ969G6 155 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 MCCC2Q9HCC0 563 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 MRPS18AQ9NVS2 196 aaKnown RBP13.02□□□□□ -0.33
C9orf3-202ENST00000297979 DIMT1Q9UNQ2 313 aaKnown RBP13.02□□□□□ -0.33
C9orf3-202ENST00000297979 LOXL2Q9Y4K0 774 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 WDFY4Q6ZS81 3184 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 FAM86C2PA6NEL3 165 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 TMX2-CTNND1H3BSU7 103 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 SCO2O43819 266 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 RAB36O95755 333 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF806P0C7X5 589 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 CD36P16671 472 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 NR4A1P22736 598 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 MST1P26927 711 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 LIPAP38571 399 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 CDH11P55287 796 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 RNLSQ5VYX0 342 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-202ENST00000297979 VASH1Q7L8A9 365 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-202ENST00000297979 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.33
C9orf3-202ENST00000297979 RNFT2Q96EX2 444 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 STRADBQ9C0K7 418 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 BAIAP2Q9UQB8 552 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 ERGIC3Q9Y282 383 aa13.02□□□□□ -0.33
C9orf3-202ENST00000297979 IGKV1D-42A0A075B6H8 117 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 WWP2O00308 870 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 SLC6A6P31641 620 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 SLC1A3P43003 542 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 CBX5P45973 191 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 MTNR1AP48039 350 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 SLC9A3P48764 834 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 RAB40BQ12829 278 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 DCAF12Q5T6F0 453 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 FAM69BQ5VUD6 431 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 NXNL2Q5VZ03 156 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 RTL4Q6ZR62 310 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 LGALS12Q96DT0 336 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 TMEM43Q9BTV4 400 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 FN3KQ9H479 309 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 HINT3Q9NQE9 182 aaKnown RBP13.01□□□□□ -0.33
C9orf3-202ENST00000297979 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
C9orf3-202ENST00000297979 B3GALT1Q9Y5Z6 326 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 EXPH5Q8NEV8 1989 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 LOC102723996A0A087X1L8 192 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 TEX51A0A1B0GUA7 166 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 ZFAND5O76080 213 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF3P17036 446 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 CFL1P23528 166 aaKnown RBP13.01□□□□□ -0.33
C9orf3-202ENST00000297979 RAB15P59190 212 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
C9orf3-202ENST00000297979 AQP6Q13520 282 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 FHL1Q13642 323 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 MED22Q15528 200 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 OR8H1Q8NGG4 311 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 OR5W2Q8NH69 310 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 KLHDC3Q9BQ90 382 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 EDEM2Q9BV94 578 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 C12orf10Q9HB07 376 aa13.01□□□□□ -0.33
C9orf3-202ENST00000297979 DMDP11532 3685 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 GMFGO60234 142 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
C9orf3-202ENST00000297979 CBFA2T3O75081 653 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 OR7A10O76100 309 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 NADKO95544 446 aaPredicted RBP13□□□□□ -0.33
C9orf3-202ENST00000297979 IGF2P01344 180 aa13□□□□□ -0.33
C9orf3-202ENST00000297979 ITPKBP27987 946 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms