RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 SCN2AQ99250 2005 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 SCN3AQ9NY46 2000 aa13.77□□□□□ -0.2
SPIDR-201ENST00000297423 LRIT2A6NDA9 550 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 PYCARD-AS1I3L0S3 204 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 PLPP1O14494 284 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 LATO43561 262 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 SSX5O60225 188 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 UGDHO60701 494 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 RBBP9O75884 186 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 POP4O95707 220 aaKnown RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 RECKO95980 971 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 RGS7BPQ6MZT1 257 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 SEZ6L2Q6UXD5 910 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 AMER3Q8N944 861 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 SDR9C7Q8NEX9 313 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 FN3KQ9H479 309 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 TRPV4Q9HBA0 871 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 ZDHHC4Q9NPG8 344 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 BIN3Q9NQY0 253 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 A8MVJ9 347 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 FADS1O60427 444 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 GREM1O60565 184 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 POP7O75817 140 aaKnown RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 APOC1P02654 83 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 ANXA2P07355 339 aaKnown RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 PRRT3Q5FWE3 981 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 ZNF627Q7L945 461 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 NUDT13Q86X67 352 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 OR13C2Q8NGS9 318 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 ZMAT3Q9HA38 289 aaKnown RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 NOX4Q9NPH5 578 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 PRMT8Q9NR22 394 aaPredicted RBP13.77□□□□□ -0.21
SPIDR-201ENST00000297423 STON1Q9Y6Q2 735 aa13.77□□□□□ -0.21
SPIDR-201ENST00000297423 EEF1E1-BLOC1S5C9J1V9 151 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 FCMRO60667 390 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 B2MP61769 119 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 EEF1A2Q05639 463 aaKnown RBP13.76□□□□□ -0.21
SPIDR-201ENST00000297423 CRMP1Q14194 572 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 GXYLT1Q4G148 440 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 PRAMEF17Q5VTA0 474 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 OTPQ5XKR4 325 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 C1orf94Q6P1W5 598 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 FAM129CQ86XR2 697 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 OR52E2Q8NGJ4 325 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 BRIX1Q8TDN6 353 aaKnown RBP13.76□□□□□ -0.21
SPIDR-201ENST00000297423 CXorf40BQ96DE9 158 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 DSPPQ9NZW4 1301 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 GREB1Q4ZG55 1949 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 TRBV5-4A0A0C4DH59 114 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 KCNAB3O43448 404 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 SC5DO75845 299 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 HTR1FP30939 366 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 FAUP35544 74 aaKnown RBP13.76□□□□□ -0.21
SPIDR-201ENST00000297423 MC3RP41968 323 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 NKPD1Q17RQ9 610 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 NHLRC3Q5JS37 347 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 EOGTQ5NDL2 527 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 MEPCEQ7L2J0 689 aaKnown RBP13.76□□□□□ -0.21
SPIDR-201ENST00000297423 CAMK1GQ96NX5 476 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 NKX2-4Q9H2Z4 354 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 FKRPQ9H9S5 495 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 OR51B4Q9Y5P0 310 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 SEC14L5O43304 696 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 LEFTY1O75610 366 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 PCSK2P16519 638 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 TEAD1P28347 426 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 MNDAP41218 407 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 SKP1P63208 163 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 GDPD4Q6W3E5 623 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 ZNF75AQ96N20 296 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 KCND3Q9UK17 655 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 CBLCQ9ULV8 474 aa13.76□□□□□ -0.21
SPIDR-201ENST00000297423 C5orf67F2Z3F1 127 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 SURF4O15260 269 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 SLC16A5O15375 505 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 SOCS5O75159 536 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 CDC123O75794 336 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-201ENST00000297423 ATP1B1P05026 303 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 TRHRP34981 398 aaPredicted RBP13.75□□□□□ -0.21
SPIDR-201ENST00000297423 PNLIPRP1P54315 467 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 TSSK4Q6SA08 328 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 OR52N1Q8NH53 320 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 PTDSS2Q9BVG9 487 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 GLIPR2Q9H4G4 154 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 TRAV18A0A075B6X5 111 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 A0A1W2PS29 197 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 C5orf51A6NDU8 294 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 PTBP1P26599 531 aaKnown RBP eCLIP13.75□□□□□ -0.214e-17■■■■■ 34
SPIDR-201ENST00000297423 VIPR2P41587 438 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 SSX6Q7RTT6 188 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 ARIH2OSQ8N7S6 290 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 OR51Q1Q8NH59 317 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 ALG14Q96F25 216 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 TRBV23OR9-2A0A075B6M9 112 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 METTL21EPA6NDL7 271 aa13.75□□□□□ -0.21
SPIDR-201ENST00000297423 UNC119BA6NIH7 251 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms