RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 TRAPPC4Q9Y296 219 aa4.56□□□□□ -1.68
CSMD3-201ENST00000297405 A0A1B0GTW7 788 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5H15A6NDH6 313 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5H1A6NKK0 313 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 F5H5K5 113 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 I6L893 689 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RTCAO00442 366 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PCDH8O95206 1070 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CRKLP46109 303 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLC6A8P48029 635 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NCBP2P52298 156 aaKnown RBP eCLIP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR2B8PP59922 312 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ACTR1AP61163 376 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 INPP5JQ15735 1006 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ANKRD46Q86W74 232 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SPPL2BQ8TCT7 592 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ENPP4Q9Y6X5 453 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM235A6NFC5 223 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 A8MV72 311 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FOXO6A8MYZ6 492 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ECI2O75521 394 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NUDT3O95989 172 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ITPRIPL2Q3MIP1 535 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FAM180BQ6P0A1 224 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 BEX2Q9BXY8 128 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 POFUT1Q9H488 388 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SCN7AQ01118 1682 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 H7C1C5 153 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PYCR1P32322 319 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NPBWR1P48145 328 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RBP2P50120 134 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLC35A2P78381 396 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ADAM5Q6NVV9 412 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OVCA2Q8WZ82 227 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SUSD6Q92537 303 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLC17A5Q9NRA2 495 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM2Q9UHN6 1383 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM129A0AVI4 362 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DHRS4L1P0CG22 281 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CR2P20023 1033 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NPBWR2P48146 333 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TMEM244Q5VVB8 128 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DHRS11Q6UWP2 260 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5L1Q8NGL2 311 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5P2Q8WZ92 322 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 BORCS6Q96GS4 357 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NSUN5Q96P11 429 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR51M1Q9H341 326 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF701Q9NV72 531 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 POLLQ9UGP5 575 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FAM155AB1AL88 458 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR2T7P0C7T2 308 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 G6PDP11413 515 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 C6P13671 934 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 MMP11P24347 488 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GPR12P47775 334 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 POU3F4P49335 361 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PCBD1P61457 104 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RNASE12Q5GAN4 147 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 C1QTNF12Q5T7M4 302 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DPPA3Q6W0C5 159 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 MAML2Q8IZL2 1156 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NLGN4XQ8N0W4 816 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SPICQ8N5J4 248 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 NLGN4YQ8NFZ3 816 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR2T27Q8NH04 317 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FUBP3Q96I24 572 aaKnown RBP eCLIP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DGAT2Q96PD7 388 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TDP1Q9NUW8 608 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SLITRK3O94933 977 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5AC1P0C628 307 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CALCBP10092 127 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SMAGPQ0VAQ4 97 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CNN3Q15417 329 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 CTSL3PQ5NE16 218 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PTRH1Q86Y79 214 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 GALNT16Q8N428 558 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SRRQ9GZT4 340 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 MRPS30Q9NP92 439 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FABP7O15540 132 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RECKO95980 971 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SNAPC2Q13487 334 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SBSNQ6UWP8 590 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FAM129CQ86XR2 697 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 DEFB106AQ8N104 65 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 IL17RCQ8NAC3 791 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 PLA2G15Q8NCC3 412 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 OR5M3Q8NGP4 307 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 FIBINQ8TAL6 211 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF107Q9UII5 783 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RIMS3Q9UJD0 308 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 TNRC6CQ9HCJ0 1690 aaKnown RBP4.55□□□□□ -1.68
CSMD3-201ENST00000297405 G3V3Y1 287 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 RNASEK-C17orf49H0YIS7 233 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SGK494L7N484 410 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 SOCS2O14508 198 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 ZNF264O43296 627 aa4.55□□□□□ -1.68
CSMD3-201ENST00000297405 KCNK5O95279 499 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms