RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PLD4Q96BZ4 506 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 NICN1Q9BSH3 213 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 LYRM2Q9NU23 88 aaPredicted RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 XKRY2A2RUG3 117 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ETV6P41212 452 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM175Q9BSA9 504 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 DNAJC15Q9Y5T4 150 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ADM5C9JUS6 153 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 CSTAP01040 98 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 CDC20Q12834 499 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 SFXN4Q6P4A7 337 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 AK3Q9UIJ7 227 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GDF2Q9UK05 429 aaPredicted RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC7A7Q9UM01 511 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 IER3IP1Q9Y5U9 82 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 BACE2Q9Y5Z0 518 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ENPP4Q9Y6X5 453 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 A6NLC8 198 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 PRNPP04156 253 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 CD52P31358 61 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 BAXQ07812 192 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GPR33Q49SQ1 333 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 LRRC56Q8IYG6 542 aaPredicted RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 LMNTD1Q8N9Z9 388 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 SIRT3Q9NTG7 399 aaPredicted RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GYPBP06028 91 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 NPY4RP50391 375 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 NKX3-2P78367 333 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GPLD1P80108 840 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 MLC1Q15049 377 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR5AR1Q8NGP9 310 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 MIOXQ9UGB7 285 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 RCAN2Q14206 197 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 AAK1Q2M2I8 961 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF789Q5FWF6 425 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GDPD3Q7L5L3 318 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 NAGSQ8N159 534 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 FAM26EQ8N5C1 309 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR4F5Q8NH21 305 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 ZNF417Q8TAU3 575 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR4F4Q96R69 305 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 DERAQ9Y315 318 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR2A25A4D2G3 310 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 TSFMP43897 325 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 BTG1P62324 171 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 NFATC2Q13469 925 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM19Q96HH6 336 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 GIPP09681 153 aaPredicted RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 MAT1AQ00266 395 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR6T1Q8NGN1 323 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 P2RX7Q99572 595 aaKnown RBP11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 RAB11FIP5Q9BXF6 653 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 OR5V1Q9UGF6 321 aa11.03□□□□□ -0.64
SHROOM3-201ENST00000296043 CCL16O15467 120 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TPOP07202 933 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 SLC17A1Q14916 467 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 GLYR1Q49A26 553 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 NBPF12Q5TAG4 269 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 GPR142Q7Z601 462 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 OR4K15Q8NH41 348 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 A0A1W2PPH5 198 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 NUDT19A8MXV4 375 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 PPP1R11O60927 126 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 CST2P09228 141 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM11P17152 192 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 HBG1P69891 147 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 HBG2P69892 147 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 RAB40BQ12829 278 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 SOWAHCQ53LP3 525 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TMEM71Q6P5X7 295 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TBC1D20Q96BZ9 403 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 SIDT1Q9NXL6 827 aaKnown RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 ABRACLQ9P1F3 81 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 MAFBQ9Y5Q3 323 aaPredicted RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TDRD6O60522 2096 aaKnown RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 GPR143P51810 404 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 TEX261Q6UWH6 196 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 OR9A1PQ8NGU1 263 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 DTD1Q8TEA8 209 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 IL1F10Q8WWZ1 152 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 RALYQ9UKM9 306 aaKnown RBP11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 U3KQ87 197 aa11.02□□□□□ -0.64
SHROOM3-201ENST00000296043 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC31A1O15431 190 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 PDGFBP01127 241 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 CAMKVQ8NCB2 501 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 ACTL8Q9H568 366 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 H7BY64 318 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 PRDX3P30048 256 aaKnown RBP11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 OR52N2Q8NGI0 321 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 PRAP1Q96NZ9 151 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 OR8D2Q9GZM6 311 aa11.02□□□□□ -0.65
SHROOM3-201ENST00000296043 SLC23A2Q9UGH3 650 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms