RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 FGF21Q9NSA1 209 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 MUTYHQ9UIF7 546 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 MKL2Q9ULH7 1088 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 E9PI62 339 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 J3QLW9 94 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 DVL2O14641 736 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 RNF13O43567 381 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 PPM1BO75688 479 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ZNF19P17023 458 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 TMED10P49755 219 aaKnown RBP12.82□□□□□ -0.36
NXF1-201ENST00000294172 HCCSP53701 268 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 FOXL2P58012 376 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 DEFA1P59665 94 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 DEFA3P59666 94 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 GPLD1P80108 840 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ELAVL1Q15717 326 aaKnown RBP12.82□□□□□ -0.36
NXF1-201ENST00000294172 ARL9Q6T311 187 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 FAM131AQ6UXB0 335 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 OR5W2Q8NH69 310 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 AP3S1Q92572 193 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ZMYND19Q96E35 227 aaPredicted RBP12.82□□□□□ -0.36
NXF1-201ENST00000294172 DIRAS2Q96HU8 199 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 SLC41A2Q96JW4 573 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 CCDC32Q9BV29 185 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 MIXL1Q9H2W2 232 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 TRIM36Q9NQ86 728 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 TIGARQ9NQ88 270 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 COMMD3Q9UBI1 195 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ICAM5Q9UMF0 924 aa12.82□□□□□ -0.36
NXF1-201ENST00000294172 ZNF264O43296 627 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 PTTG1O95997 202 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 MT-ND5P03915 603 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 IGKV3-11P04433 115 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 FOSL2P15408 326 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 ARRB1P49407 418 aaPredicted RBP12.81□□□□□ -0.36
NXF1-201ENST00000294172 SKP2Q13309 424 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 DDI2Q5TDH0 399 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 HLA-DQA1Q5Y7H0 255 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 CCDC74AQ96AQ1 378 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
NXF1-201ENST00000294172 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
NXF1-201ENST00000294172 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
NXF1-201ENST00000294172 IGKV1D-42A0A075B6H8 117 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 LINC00854A0A1B0GVQ3 168 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 A0A1B0GX78 115 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 TCRBV16S1A1N1A0A5B0 115 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SHISA3A0PJX4 238 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 FRG2CA6NGY1 282 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 BLOC1S5-TXNDC5H3BN57 136 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ICOSLGO75144 302 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 OR7A10O76100 309 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 DHPSP49366 369 aaPredicted RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 NR0B1P51843 470 aaKnown RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 ERVK-25P63136 954 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ZNF79Q15937 498 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 FAAH2Q6GMR7 532 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 CARFQ8N187 725 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 FAM71CQ8NEG0 241 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ZNF563Q8TA94 476 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ADIPOR1Q96A54 375 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 WDFY2Q96P53 400 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 NMNAT3Q96T66 252 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 COQ7Q99807 217 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 KLHDC3Q9BQ90 382 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SLC7A5P2Q9GIP4 190 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 INPP5EQ9NRR6 644 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 MRTO4Q9UKD2 239 aaKnown RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 ATXN7L1Q9ULK2 861 aaPredicted RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 FRYLO94915 3013 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 CACNA1EQ15878 2313 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 MN1Q10571 1320 aaPredicted RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 CPED1A4D0V7 1026 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SLC35F4A4IF30 521 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 FABP12A6NFH5 140 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 IMPA2O14732 288 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 IL12BP29460 328 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 OR12D2P58182 307 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 BDH1Q02338 343 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ZNF85Q03923 595 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SHBQ15464 509 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 GDPD3Q7L5L3 318 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 SSX6Q7RTT6 188 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 C9orf40Q8IXQ3 194 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 RFLNBQ8N5W9 214 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
NXF1-201ENST00000294172 RTN4RQ9BZR6 473 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 VN1R1Q9GZP7 353 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 CTSFQ9UBX1 484 aa12.8□□□□□ -0.36
NXF1-201ENST00000294172 TRAPPC4Q9Y296 219 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms