RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 C5AR1P21730 350 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 GJA4P35212 333 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 GLP1RP43220 463 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ZFP36L2P47974 494 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CSNK1G2P78368 415 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ERV3-1Q14264 604 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 FAHD1Q6P587 224 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 DHRS4L2Q6PKH6 230 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 P4HA3Q7Z4N8 544 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SCGB1C1Q8TD33 95 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 APOOQ9BUR5 198 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 HOXD1Q9GZZ0 328 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 NPAP1Q9NZP6 1156 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ZC3H12DA2A288 527 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 DCDC2BA2VCK2 349 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SGK494L7N484 410 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SOX1O00570 391 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TO15178 435 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TNFP01375 233 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ATP5A1P25705 553 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 MLLT3P42568 568 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC26A5P58743 744 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 MLLT11Q13015 90 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CHRFAM7AQ494W8 412 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 PDSS1Q5T2R2 415 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 LRRC28Q86X40 367 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 OR5W2Q8NH69 310 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ACOT11Q8WXI4 607 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 MICU1Q9BPX6 476 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 LSM5Q9Y4Y9 91 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 RBBP6Q7Z6E9 1792 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 GXYLT2A0PJZ3 443 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 HMGN4O00479 90 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SCG5P05408 212 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 AMY2BP19961 511 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 LIM2P55344 173 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 RAE1P78406 368 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 OR52I1Q8NGK6 324 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CREB3L4Q8TEY5 395 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TMEM255BQ8WV15 326 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 PHB2Q99623 299 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC52A3Q9NQ40 469 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CCDC88CQ9P219 2028 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 M0R082 166 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 KIAA0355O15063 1070 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TLX3O43711 291 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 PEX14O75381 377 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 RDH16O75452 317 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SPNP16150 400 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 HLA-DMAP28067 261 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 ETV5P41161 510 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 BCL6P41182 706 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CCR6P51684 374 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 CXADRP78310 365 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 PUS10Q3MIT2 529 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 AVPI1Q5T686 147 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 NKAIN4Q8IVV8 208 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 THAP3Q8WTV1 239 aaPredicted RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 TMEM239Q8WW34 195 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 DDOQ99489 341 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 UNKLQ9H9P5 680 aaKnown RBP11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC6A14Q9UN76 642 aa11.68□□□□□ -0.54
SLC6A1-201ENST00000287766 KCNE1BA0A087WTH5 132 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 TCRBP04435 133 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 PSMB1P20618 241 aaKnown RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 NRG3P56975 720 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 RPS15AP62244 130 aaKnown RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 HTR4Q13639 388 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 TECPR1Q7Z6L1 1165 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 ZER1Q7Z7L7 766 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 OR13C2Q8NGS9 318 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 PDXPQ96GD0 296 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 PTCHD1Q96NR3 888 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 FAM83CQ9BQN1 747 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 ALOXE3Q9BYJ1 711 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 APMAPQ9HDC9 416 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 PTTG3PQ9NZH4 202 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 LRFN1Q9P244 771 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 DHDHQ9UQ10 334 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 PLXNB2O15031 1838 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 C17orf113A0A1B0GUU1 675 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 ACOT7O00154 380 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 FCMRO60667 390 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 SLC43A1O75387 559 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 ERCC1P07992 297 aaPredicted RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 SNRPBP14678 240 aaKnown RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 CAV2P51636 162 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 RAB40BQ12829 278 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 ARHGAP19Q14CB8 494 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 C1orf94Q6P1W5 598 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 CMIPQ8IY22 773 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 SMAP2Q8WU79 429 aaPredicted RBP11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 UCN3Q969E3 161 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 LRRC46Q96FV0 321 aa11.67□□□□□ -0.54
SLC6A1-201ENST00000287766 DPYSL5Q9BPU6 564 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms