RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 GRB2P62993 217 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 KCNJ10P78508 379 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ESPL1Q14674 2120 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SFT2D3Q587I9 215 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RANBP10Q6VN20 620 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GDPD3Q7L5L3 318 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SYT13Q7L8C5 426 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PRICKLE2Q7Z3G6 844 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC35F3Q8IY50 421 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BRIX1Q8TDN6 353 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 UBTD2Q8WUN7 234 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MYLIPQ8WY64 445 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MOCOSQ96EN8 888 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MBOAT4Q96T53 435 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GMLQ99445 158 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HDAC8Q9BY41 377 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NMNAT2Q9BZQ4 307 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 WDR37Q9Y2I8 494 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ROS1P08922 2347 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DCDC2BA2VCK2 349 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 E9PI62 339 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HCRTR1O43613 425 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NXPH2O95156 264 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FOSL1P15407 271 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CBLP22681 906 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR1D4P47884 311 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TLE4Q04727 773 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GGTA1PQ4G0N0 100 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PODNL1Q6PEZ8 512 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PGAP1Q75T13 922 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DND1Q8IYX4 353 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ENDOVQ8N8Q3 282 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR5AR1Q8NGP9 310 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MITD1Q8WV92 249 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FRZBQ92765 325 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FUBP1Q96AE4 644 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MRPL38Q96DV4 380 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MUS81Q96NY9 551 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BIRC8Q96P09 236 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BEX2Q9BXY8 128 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TP63Q9H3D4 680 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 EGLN3Q9H6Z9 239 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BEX1Q9HBH7 125 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF346Q9UL40 294 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HS3ST3A1Q9Y663 406 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PRAMEF27A3QJZ7 478 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 H3BSH0 61 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FZD7O75084 574 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HLA-AP01891 365 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FGF3P11487 239 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 MLLT10P55197 1068 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 BPIFB3P59826 476 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CAMK2BQ13554 666 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HES1Q14469 280 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ZNF266Q14584 549 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SLC10A1Q14973 349 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PEA15Q15121 130 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM31Q5JXX7 168 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GAREM2Q75VX8 874 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LRRC28Q86X40 367 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NLGN4XQ8N0W4 816 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TMEM151AQ8N4L1 468 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 C19orf47Q8N9M1 422 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CHDHQ8NE62 594 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CNIH3Q8TBE1 160 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 STT3BQ8TCJ2 826 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LGALS12Q96DT0 336 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NTMT1Q9BV86 223 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 DPH1Q9BZG8 443 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SEMA4CQ9C0C4 833 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TEX10Q9NXF1 929 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RIMS3Q9UJD0 308 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ATXN7L1Q9ULK2 861 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 NOSIPQ9Y314 301 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 IER3IP1Q9Y5U9 82 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 FEZF1A0PJY2 475 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 LINC01387J3KSC0 135 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 OR7C1O76099 320 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PPP1R3DO95685 299 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CRYABP02511 175 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 HLA-DOBP13765 273 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 GJA4P35212 333 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SOX3P41225 446 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 PPT1P50897 306 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 IL13RA1P78552 427 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 EIF3IQ13347 325 aaKnown RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 Q499Y3 187 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 KDF1Q8NAX2 398 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 TERB2Q8NHR7 220 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 C7orf43Q8WVR3 580 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 C17orf50Q8WW18 174 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RIMS4Q9H426 269 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 CNIH4Q9P003 139 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 KIAA1456Q9P272 454 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 POLDIP2Q9Y2S7 368 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 WTIPA6NIX2 430 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 SGK494L7N484 410 aa3.8□□□□□ -1.8
SCN3A-201ENST00000283254 RNF225M0QZC1 329 aaPredicted RBP3.8□□□□□ -1.8
SCN3A-201ENST00000283254 ITM2AO43736 263 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms