RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ERGIC1Q969X5 290 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 C8orf44Q96CB5 159 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 TMA16Q96EY4 203 aaKnown RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 IL4I1Q96RQ9 567 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 S1PR3Q99500 378 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 NDNQ99608 321 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 NAPGQ99747 312 aaPredicted RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 THAP7Q9BT49 309 aaPredicted RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 SYT11Q9BT88 431 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 ERVK-6Q9BXR3 956 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 SLC29A3Q9BZD2 475 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 NXF3Q9H4D5 531 aaKnown RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 SLC40A1Q9NP59 571 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 SPAG4Q9NPE6 437 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 SLC52A3Q9NQ40 469 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 MRPL40Q9NQ50 206 aaKnown RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 OR2S2Q9NQN1 319 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 C8orf4Q9NR00 106 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 MARCH5Q9NX47 278 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 GNG12Q9UBI6 72 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 POLDIP2Q9Y2S7 368 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 PRG3Q9Y2Y8 225 aaPredicted RBP4.08□□□□□ -1.76
CD44-202ENST00000278385 MEMO1Q9Y316 297 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 TMED3Q9Y3Q3 217 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 LOXL2Q9Y4K0 774 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 HES2Q9Y543 173 aa4.08□□□□□ -1.76
CD44-202ENST00000278385 SPTBN5Q9NRC6 3674 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 KCNE1BA0A087WTH5 132 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 KBTBD11-OT1A0A1B0GTJ5 212 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 BCLAF3A2AJT9 711 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 CLEC18AA5D8T8 446 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 FABP12A6NFH5 140 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CCT8L1PA6NM43 557 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 PP2D1A8MPX8 630 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 KCNU1A8MYU2 1149 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MKRN2OSH3BPM6 223 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 KLRC4-KLRK1H3BQV0 150 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 DVL1O14640 695 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 LIN7AO14910 233 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 TOX3O15405 576 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 SPINT2O43291 252 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 GMDSO60547 372 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 TSPAN2O60636 221 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 GPX5O75715 221 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 C1QL1O75973 258 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SCELO95171 688 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 VAPBO95292 243 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 GLUD1P00367 558 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 RPN2P04844 631 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 LCKP06239 509 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 GSTA2P09210 222 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 HSMCR30P0CW71 290 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CBSLP0DN79 551 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ZNF26P17031 533 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 CFL1P23528 166 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 CD82P27701 267 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 CBSP35520 551 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CFHR2P36980 270 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 AVPR1AP37288 418 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 FEN1P39748 380 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 ACADSBP45954 432 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MRPL19P49406 292 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 GLUD2P49448 558 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CTSCP53634 463 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 UCNP55089 124 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CD81P60033 236 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTBP60709 375 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTA2P62736 377 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTG1P63261 375 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTG2P63267 376 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTC1P68032 377 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ACTA1P68133 377 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 LCN2P80188 198 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 FOXF2Q12947 444 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MADCAM1Q13477 382 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 HNF4GQ14541 408 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ZNF268Q14587 947 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 THOC7Q6I9Y2 204 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 CLEC18BQ6UXF7 455 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 DCDC5Q6ZRR9 648 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 TFAP2DQ7Z6R9 452 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 PRUNE1Q86TP1 453 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 PALB2Q86YC2 1186 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 RBFAQ8N0V3 343 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 DAW1Q8N136 415 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ARHGAP18Q8N392 663 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 FGFRL1Q8N441 504 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MARVELD2Q8N4S9 558 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SLC5A8Q8N695 610 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CLDN19Q8N6F1 224 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 OR1L6Q8NGR2 347 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 NUBPLQ8TB37 319 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 TEX47Q8TBZ9 253 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SORCS1Q8WY21 1168 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 TAAR8Q969N4 342 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SLC35B4Q969S0 331 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms