RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 RBM24Q9BX46 236 aaKnown RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SIAEQ9HAT2 523 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 DOCK11Q5JSL3 2073 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SLC43A1O75387 559 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SSTR4P31391 388 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF133P52736 654 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 PDLIM3Q53GG5 364 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 HIST2H3AQ71DI3 136 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR9K2Q8NGE7 335 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 USB1Q9BQ65 265 aaKnown RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 EGLN3Q9H6Z9 239 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SLC6A20Q9NP91 592 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 KIF26BQ2KJY2 2108 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 LOC105369274A0A096LPK9 316 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 APOOLQ6UXV4 268 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NAA40Q86UY6 237 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 OR4N4Q8N0Y3 316 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SPTA1P02549 2419 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 CEBPZOSA8MTT3 80 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SDC1P18827 310 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 PRPH2P23942 346 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GABRR1P24046 479 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 PRR11Q96HE9 360 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SERTAD4Q9NUC0 356 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MYOTQ9UBF9 498 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 DNAJB11Q9UBS4 358 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SCG5P05408 212 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 RAB6AP20340 208 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 IVDP26440 423 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 IDUAP35475 653 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GPR155Q7Z3F1 870 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NIPAL2Q9H841 368 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 CBLCQ9ULV8 474 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SGCEO43556 437 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 ONECUT3O60422 494 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 POU3F2P20265 443 aaPredicted RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 LINC00299Q6ZSB3 139 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MISPQ8IVT2 679 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 NRG4Q8WWG1 115 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 GTF2H4Q92759 462 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 WASH6PQ9NQA3 447 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 SIDT1Q9NXL6 827 aaKnown RBP7.47□□□□□ -1.21
LIMD1-201ENST00000273317 MOKQ9UQ07 419 aa7.47□□□□□ -1.21
LIMD1-201ENST00000273317 TDRD6O60522 2096 aaKnown RBP7.46□□□□□ -1.21
LIMD1-201ENST00000273317 CBY3A6NI87 242 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 ZFC3H1O60293 1989 aaKnown RBP7.46□□□□□ -1.21
LIMD1-201ENST00000273317 OR8J2Q8NGG1 315 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 THAP3Q8WTV1 239 aaPredicted RBP7.46□□□□□ -1.21
LIMD1-201ENST00000273317 IL17FQ96PD4 163 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 DCDC2BA2VCK2 349 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 FZD9O00144 591 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 ARAFP10398 606 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 CATR1Q13166 79 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 POU4F3Q15319 338 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 ZNF74Q16587 644 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 PIP5KL1Q5T9C9 394 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 MFSD6LQ8IWD5 586 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 KCNJ15Q99712 375 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 TIMM29Q9BSF4 260 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 STEAP1Q9UHE8 339 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 OR6C65A6NJZ3 312 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 GABRPO00591 440 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 IL1RNP18510 177 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 SERPINF1P36955 418 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 SLC14A1Q13336 389 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 B3GLCTQ6Y288 498 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 GIMAP1Q8WWP7 306 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 SAP130Q9H0E3 1048 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 SMCO4Q9NRQ5 59 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 SPATA6Q9NWH7 488 aaPredicted RBP7.46□□□□□ -1.21
LIMD1-201ENST00000273317 PGAP2Q9UHJ9 254 aa7.46□□□□□ -1.21
LIMD1-201ENST00000273317 RTCAO00442 366 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 GJA5P36382 358 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 MTNR1BP49286 362 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 RAB11AP62491 216 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PODNL1Q6PEZ8 512 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 MEX3BQ6ZN04 569 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 CBLL1Q75N03 491 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 SPRED1Q7Z699 444 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PLPP5Q8NEB5 264 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 OCSTAMPQ9BR26 566 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 NIPSNAP3BQ9BS92 247 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 METTL9Q9H1A3 318 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 LIN7BQ9HAP6 207 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 RBFOX1Q9NWB1 397 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 BMP4P12644 408 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 CASP3P42574 277 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PLK5Q496M5 336 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 MFSD9Q8NBP5 474 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 KCNG3Q8TAE7 436 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ST8SIA2Q92186 375 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ATXN7L1Q9ULK2 861 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 DICER1Q9UPY3 1922 aaKnown RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PLSCR5A0PG75 271 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 F5H5K5 113 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 GALR3O60755 368 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-201ENST00000273317 PRLHRP49683 370 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 ZNF266Q14584 549 aa7.46□□□□□ -1.22
LIMD1-201ENST00000273317 FTSJ1Q9UET6 329 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms